RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 CLCA3PQ9Y6N3 262 aa12.65□□□□□ -0.38
HCFC2-202ENST00000544223 DCHS1Q96JQ0 3298 aa12.65□□□□□ -0.38
HCFC2-202ENST00000544223 A0A1B0GX78 115 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 NID1P14543 1247 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 UGT2B15P54855 530 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 SKP1P63208 163 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 TUBA4AP68366 448 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 DOC2BQ14184 412 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 ACSM5Q6NUN0 579 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 COX15Q7KZN9 410 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 PRSS42Q7Z5A4 293 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 SETD9Q8NE22 299 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 ZNF524Q96C55 264 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 STACQ99469 402 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 TSC22D3Q99576 134 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 RTN4RQ9BZR6 473 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 KLHL28Q9NXS3 571 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 TVP23BQ9NYZ1 205 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 KNTC1P50748 2209 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 PMS2P1A4D2B8 440 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 TRIM64CA6NLI5 447 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 ABCB7O75027 752 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 SCRG1O75711 98 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 SP9P0CG40 484 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 CCL4P13236 92 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 GCGRP47871 477 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 SLC37A1P57057 533 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 RHAGQ02094 409 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 DSG2Q14126 1118 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 ANGPT1Q15389 498 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 ZNHIT3Q15649 155 aaPredicted RBP12.64□□□□□ -0.39
HCFC2-202ENST00000544223 MED25Q71SY5 747 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 OR8D4Q8NGM9 314 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 RHOXF1Q8NHV9 184 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 SLC2A12Q8TD20 617 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 C8orf44Q96CB5 159 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 NUDT9Q9BW91 350 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 ENKD1Q9H0I2 346 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 PRDM9Q9NQV7 894 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 PCDHGA10Q9Y5H3 936 aa12.64□□□□□ -0.39
HCFC2-202ENST00000544223 ZFHX2Q9C0A1 2572 aaPredicted RBP12.64□□□□□ -0.39
HCFC2-202ENST00000544223 SMIM31A0A1B0GVY4 71 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 ZAR1LA6NP61 321 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 RFPL3O75679 317 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 LCKP06239 509 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 OSMP13725 252 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 ZNF28P17035 718 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 PCMT1P22061 227 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 SLC35A2P78381 396 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 FUT7Q11130 342 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 OR1Q1Q15612 314 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 PRAMEF8Q5VWM4 474 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 PRAMEF7Q5VXH5 474 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 DHRS4L2Q6PKH6 230 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 APOOLQ6UXV4 268 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 PTCHD4Q6ZW05 846 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 CADM2Q8N3J6 435 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 TCEANCQ8N8B7 351 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 IER2Q9BTL4 223 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 CBLCQ9ULV8 474 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.63□□□□□ -0.39
HCFC2-202ENST00000544223 AHCTF1Q8WYP5 2266 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 MED12Q93074 2177 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 LRRN3E7EW58 273 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 SYT5O00445 386 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 DSCR3O14972 297 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 OIP5O43482 229 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 PRAMEF2O60811 474 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 CNOT3O75175 753 aaKnown RBP12.63□□□□□ -0.39
HCFC2-202ENST00000544223 COQ9O75208 318 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 ENTPD6O75354 484 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 WISP1O95388 367 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 DDAH2O95865 285 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 AGR2O95994 175 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 DBIP07108 87 aaKnown RBP12.63□□□□□ -0.39
HCFC2-202ENST00000544223 STSP08842 583 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 GABRB1P18505 474 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 RPS4Y1P22090 263 aaKnown RBP12.63□□□□□ -0.39
HCFC2-202ENST00000544223 LSM3P62310 102 aaKnown RBP12.63□□□□□ -0.39
HCFC2-202ENST00000544223 IL18R1Q13478 541 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 PROX2Q3B8N5 592 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 OR5M3Q8NGP4 307 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 STT3BQ8TCJ2 826 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 ISOC1Q96CN7 298 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 ZC3H10Q96K80 434 aaKnown RBP12.63□□□□□ -0.39
HCFC2-202ENST00000544223 ADOQ96SZ5 270 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 PRSS27Q9BQR3 290 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 LMF2Q9BU23 707 aaKnown RBP12.63□□□□□ -0.39
HCFC2-202ENST00000544223 DPH1Q9BZG8 443 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 IFT52Q9Y366 437 aa12.63□□□□□ -0.39
HCFC2-202ENST00000544223 PRKYO43930 277 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 ATE1O95260 518 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 ADAP00813 363 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 TGFBR1P36897 503 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 GP2P55259 537 aaKnown RBP12.62□□□□□ -0.39
HCFC2-202ENST00000544223 FCRLBQ6BAA4 426 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 SLC30A6Q6NXT4 461 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 APLFQ8IW19 511 aaPredicted RBP12.62□□□□□ -0.39
HCFC2-202ENST00000544223 C9orf40Q8IXQ3 194 aa12.62□□□□□ -0.39
HCFC2-202ENST00000544223 ZNF721Q8TF20 911 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms