RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 OR4C3Q8NH37 302 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 OR2V1Q8NHB1 315 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 SLC9A6Q92581 669 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 AKAP1Q92667 903 aaKnown RBP eCLIP20.22■□□□□ 0.83
CDKN3-207ENST00000543789 ZBTB8AQ96BR9 441 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 GSTO2Q9H4Y5 243 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 EQTNQ9NQ60 294 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 LAMP3Q9UQV4 416 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 DSCAMO60469 2012 aa20.22■□□□□ 0.83
CDKN3-207ENST00000543789 ROS1P08922 2347 aa20.21■□□□□ 0.83
CDKN3-207ENST00000543789 UBFD1O14562 309 aaKnown RBP20.21■□□□□ 0.83
CDKN3-207ENST00000543789 TNFSF11O14788 317 aa20.21■□□□□ 0.83
CDKN3-207ENST00000543789 PRPS2P11908 318 aa20.21■□□□□ 0.83
CDKN3-207ENST00000543789 PSMB1P20618 241 aaKnown RBP20.21■□□□□ 0.83
CDKN3-207ENST00000543789 GCAP28676 217 aa20.21■□□□□ 0.83
CDKN3-207ENST00000543789 ECHS1P30084 290 aa20.21■□□□□ 0.83
CDKN3-207ENST00000543789 SLC29A2Q14542 456 aa20.21■□□□□ 0.83
CDKN3-207ENST00000543789 VPS26BQ4G0F5 336 aa20.21■□□□□ 0.83
CDKN3-207ENST00000543789 NOXRED1Q6NXP6 359 aa20.21■□□□□ 0.83
CDKN3-207ENST00000543789 IKBIPQ70UQ0 350 aa20.21■□□□□ 0.83
CDKN3-207ENST00000543789 ZNF551Q7Z340 670 aaPredicted RBP20.21■□□□□ 0.83
CDKN3-207ENST00000543789 GALNT10Q86SR1 603 aa20.21■□□□□ 0.83
CDKN3-207ENST00000543789 CCNYL1Q8N7R7 359 aa20.21■□□□□ 0.83
CDKN3-207ENST00000543789 ZANQ9Y493 2812 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 A0A1W2PRB8 838 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 C7orf72A4D263 438 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 NKX2-2O95096 273 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 NGFRP08138 427 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 NID1P14543 1247 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 PSMA4P25789 261 aaKnown RBP20.2■□□□□ 0.82
CDKN3-207ENST00000543789 MAP3K8P41279 467 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 HSPB3Q12988 150 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 GLE1Q53GS7 698 aaKnown RBP20.2■□□□□ 0.82
CDKN3-207ENST00000543789 PDSS1Q5T2R2 415 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 HBMQ6B0K9 141 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 ALKBH2Q6NS38 261 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 MFSD12Q6NUT3 480 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 CEP70Q8NHQ1 597 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 ACTRT2Q8TDY3 377 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 HOXB13Q92826 284 aaPredicted RBP20.2■□□□□ 0.82
CDKN3-207ENST00000543789 OSTF1Q92882 214 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 RNF145Q96MT1 663 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 NPAS1Q99742 590 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 HDHD5Q9BXW7 423 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 MED17Q9NVC6 651 aa20.2■□□□□ 0.82
CDKN3-207ENST00000543789 A0A0J9YW62 118 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 GOLGA8RI6L899 631 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 CRCPO75575 148 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 RSL1D1O76021 490 aaKnown RBP20.19■□□□□ 0.82
CDKN3-207ENST00000543789 SOX30O94993 753 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 OXSR1O95747 527 aaPredicted RBP20.19■□□□□ 0.82
CDKN3-207ENST00000543789 GSTA1P08263 222 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 ME2P23368 584 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 GPC1P35052 558 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 ZNF41P51814 821 aaPredicted RBP20.19■□□□□ 0.82
CDKN3-207ENST00000543789 PRKAG1P54619 331 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 RPS4XP62701 263 aaKnown RBP20.19■□□□□ 0.82
CDKN3-207ENST00000543789 SLC18A2Q05940 514 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 WHAMMP3Q1A5X7 153 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 CLEC12BQ2HXU8 276 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 CDRT4Q8N9R6 151 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 GATSQ8NAP1 163 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 STEAP2Q8NFT2 490 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 EGLN2Q96KS0 407 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 TACO1Q9BSH4 297 aaKnown RBP20.19■□□□□ 0.82
CDKN3-207ENST00000543789 IQCGQ9H095 443 aaKnown RBP20.19■□□□□ 0.82
CDKN3-207ENST00000543789 C12orf49Q9H741 205 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 TMEM185BQ9H7F4 350 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 RRAGDQ9NQL2 400 aaPredicted RBP20.19■□□□□ 0.82
CDKN3-207ENST00000543789 USF3Q68DE3 2245 aa20.19■□□□□ 0.82
CDKN3-207ENST00000543789 H3BQF6 201 aa20.18■□□□□ 0.82
CDKN3-207ENST00000543789 URI1O94763 535 aaPredicted RBP20.18■□□□□ 0.82
CDKN3-207ENST00000543789 TUBBP07437 444 aa20.18■□□□□ 0.82
CDKN3-207ENST00000543789 ABHD2P08910 425 aa20.18■□□□□ 0.82
CDKN3-207ENST00000543789 AGTR1P30556 359 aa20.18■□□□□ 0.82
CDKN3-207ENST00000543789 CARD18P57730 90 aa20.18■□□□□ 0.82
CDKN3-207ENST00000543789 KRTAP1-1Q07627 177 aa20.18■□□□□ 0.82
CDKN3-207ENST00000543789 PLPPR5Q32ZL2 321 aa20.18■□□□□ 0.82
CDKN3-207ENST00000543789 ADAM5Q6NVV9 412 aa20.18■□□□□ 0.82
CDKN3-207ENST00000543789 RAB3IL1Q8TBN0 382 aa20.18■□□□□ 0.82
CDKN3-207ENST00000543789 FAM110BQ8TC76 370 aa20.18■□□□□ 0.82
CDKN3-207ENST00000543789 ACMSDQ8TDX5 336 aa20.18■□□□□ 0.82
CDKN3-207ENST00000543789 S100PBPQ96BU1 408 aa20.18■□□□□ 0.82
CDKN3-207ENST00000543789 CCDC126Q96EE4 140 aa20.18■□□□□ 0.82
CDKN3-207ENST00000543789 TRMT61AQ96FX7 289 aaKnown RBP20.18■□□□□ 0.82
CDKN3-207ENST00000543789 REPIN1Q9BWE0 567 aaKnown RBP20.18■□□□□ 0.82
CDKN3-207ENST00000543789 DCDC2Q9UHG0 476 aa20.18■□□□□ 0.82
CDKN3-207ENST00000543789 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.18■□□□□ 0.82
CDKN3-207ENST00000543789 RAI1Q7Z5J4 1906 aaPredicted RBP20.17■□□□□ 0.82
CDKN3-207ENST00000543789 RNF223E7ERA6 249 aa20.17■□□□□ 0.82
CDKN3-207ENST00000543789 PDPK1O15530 556 aa20.17■□□□□ 0.82
CDKN3-207ENST00000543789 SEC22BO75396 215 aa20.17■□□□□ 0.82
CDKN3-207ENST00000543789 PABPC4LP0CB38 370 aaKnown RBP20.17■□□□□ 0.82
CDKN3-207ENST00000543789 PYGBP11216 843 aa20.17■□□□□ 0.82
CDKN3-207ENST00000543789 HPGDP15428 266 aa20.17■□□□□ 0.82
CDKN3-207ENST00000543789 NAA20P61599 178 aa20.17■□□□□ 0.82
CDKN3-207ENST00000543789 ZNF844Q08AG5 666 aa20.17■□□□□ 0.82
CDKN3-207ENST00000543789 VEZF1Q14119 521 aa20.17■□□□□ 0.82
CDKN3-207ENST00000543789 KIAA0040Q15053 153 aa20.17■□□□□ 0.82
CDKN3-207ENST00000543789 ETFDHQ16134 617 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms