RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 PHOSPHO1Q8TCT1 267 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 EXTL1Q92935 676 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 HGDQ93099 445 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 DTNBP1Q96EV8 351 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 TPD52L3Q96J77 140 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 PINK1Q9BXM7 581 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 GORASP2Q9H8Y8 452 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 CNIH4Q9P003 139 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 ZNF443Q9Y2A4 671 aaPredicted RBP10.92□□□□□ -0.66
DDB1-223ENST00000543658 SLC35A3Q9Y2D2 325 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 PCDHGB7Q9Y5F8 929 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 V9GYQ6 96 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 NCOR2Q9Y618 2525 aa10.92□□□□□ -0.66
DDB1-223ENST00000543658 A0A1W2PQD3 144 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 H0YHG0 523 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 SLC25A12O75746 678 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 CYP7B1O75881 506 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 ZIC2O95409 532 aaPredicted RBP10.91□□□□□ -0.66
DDB1-223ENST00000543658 CSTAP01040 98 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 NGFRP08138 427 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 UBL4AP11441 157 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 NID1P14543 1247 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 ATP6V1B2P21281 511 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 RPS4Y1P22090 263 aaKnown RBP10.91□□□□□ -0.66
DDB1-223ENST00000543658 PRKAR1BP31321 381 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 MASP1P48740 699 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 SNTA1Q13424 505 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 FGFBP1Q14512 234 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 MAPK11Q15759 364 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 FXNQ16595 210 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 CYBRD1Q53TN4 286 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 PRAMEF20Q5VT98 475 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 SLC30A6Q6NXT4 461 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 EIF3MQ7L2H7 374 aaKnown RBP10.91□□□□□ -0.66
DDB1-223ENST00000543658 VRK2Q86Y07 508 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 CMIPQ8IY22 773 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 C10orf67Q8IYJ2 551 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 GATSQ8NAP1 163 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 SMYD1Q8NB12 490 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 TMEM178AQ8NBL3 297 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 FAM98AQ8NCA5 519 aaKnown RBP10.91□□□□□ -0.66
DDB1-223ENST00000543658 PSD4Q8NDX1 1056 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 PAQR8Q8TEZ7 354 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 SNRNP27Q8WVK2 155 aaKnown RBP10.91□□□□□ -0.66
DDB1-223ENST00000543658 NODALQ96S42 347 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 SMAD5Q99717 465 aaKnown RBP10.91□□□□□ -0.66
DDB1-223ENST00000543658 DOHHQ9BU89 302 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 UGT2B28Q9BY64 529 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 EVA1AQ9H8M9 152 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 PLA2G3Q9NZ20 509 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 PPP4R1LQ9P1A2 415 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 SLC9A8Q9Y2E8 581 aa10.91□□□□□ -0.66
DDB1-223ENST00000543658 KLF13Q9Y2Y9 288 aaPredicted RBP10.91□□□□□ -0.66
DDB1-223ENST00000543658 SERINC4A6NH21 518 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 AQP12BA6NM10 295 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 ALG1L2C9J202 215 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 ANKRD65E5RJM6 399 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 DPM1O60762 260 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 MFN2O95140 757 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 ANGPTL1O95841 491 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 UQCRBP14927 111 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 PSMA4P25789 261 aaKnown RBP10.9□□□□□ -0.66
DDB1-223ENST00000543658 CD96P40200 585 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 CCR4P51679 360 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 KCNJ10P78508 379 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 MS4A2Q01362 244 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 MRPL2Q5T653 305 aaKnown RBP10.9□□□□□ -0.66
DDB1-223ENST00000543658 ZNF468Q5VIY5 522 aaPredicted RBP10.9□□□□□ -0.66
DDB1-223ENST00000543658 RNF220Q5VTB9 566 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 DESI1Q6ICB0 168 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 DHRS4L2Q6PKH6 230 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 ZNF836Q6ZNA1 936 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 CBLL1Q75N03 491 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 PACS2Q86VP3 889 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 AQP12AQ8IXF9 295 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 ZNF440Q8IYI8 595 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 POGLUT1Q8NBL1 392 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 OR52E4Q8NGH9 312 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 OR4C3Q8NH37 302 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 GRHL3Q8TE85 626 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 HAS2Q92819 552 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 STMN2Q93045 179 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 UTP4Q969X6 686 aaKnown RBP10.9□□□□□ -0.66
DDB1-223ENST00000543658 TAMM41Q96BW9 452 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 HSH2DQ96JZ2 352 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 DCAF13Q9NV06 445 aaKnown RBP10.9□□□□□ -0.66
DDB1-223ENST00000543658 OLAHQ9NV23 265 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 FLRT3Q9NZU0 649 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 WIF1Q9Y5W5 379 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 CHCHD2Q9Y6H1 151 aaPredicted RBP10.9□□□□□ -0.66
DDB1-223ENST00000543658 HEATR5AQ86XA9 2040 aa10.9□□□□□ -0.66
DDB1-223ENST00000543658 PTPRQQ9UMZ3 2332 aa10.9□□□□□ -0.67
DDB1-223ENST00000543658 IGF2RP11717 2491 aa10.89□□□□□ -0.67
DDB1-223ENST00000543658 TRAV17A0A0B4J275 112 aa10.89□□□□□ -0.67
DDB1-223ENST00000543658 FAM47E-STBD1D6RA91 191 aa10.89□□□□□ -0.67
DDB1-223ENST00000543658 NPIPB9F8W1W9 429 aa10.89□□□□□ -0.67
DDB1-223ENST00000543658 KLRC4-KLRK1H3BQV0 150 aa10.89□□□□□ -0.67
DDB1-223ENST00000543658 SYT5O00445 386 aa10.89□□□□□ -0.67
DDB1-223ENST00000543658 ACOT8O14734 319 aa10.89□□□□□ -0.67
DDB1-223ENST00000543658 ZNF264O43296 627 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms