RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	NME2P1	O60361	137 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	FADS1	O60427	444 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	UGT2B17	O75795	530 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	DNAJC8	O75937	253 aa	Predicted RBP	9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	PDE5A	O76074	875 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	ZIC2	O95409	532 aa	Predicted RBP	9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	STAMBP	O95630	424 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	ANGPTL1	O95841	491 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	IFNA14	P01570	189 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	DBI	P07108	87 aa	Known RBP	9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	NGFR	P08138	427 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	GUSB	P08236	651 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	ETS2	P15036	469 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	NCK1	P16333	377 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	NME2	P22392	152 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	MSX2	P35548	267 aa	Predicted RBP	9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	PGM1	P36871	562 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	MEOX1	P50221	254 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	SNTA1	Q13424	505 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	CEACAM7	Q14002	265 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	VEZF1	Q14119	521 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	ZNF141	Q15928	474 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	PLEKHN1	Q494U1	663 aa	Predicted RBP	9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	LIN52	Q52LA3	116 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	LRRC23	Q53EV4	343 aa	Predicted RBP	9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	KLHL26	Q53HC5	615 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	ZNF311	Q5JNZ3	666 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	COLEC12	Q5KU26	742 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	OR5M10	Q6IEU7	315 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545		Q6ZS92	163 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	PATL1	Q86TB9	770 aa	Known RBP	9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	ARMC8	Q8IUR7	673 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	ARHGAP24	Q8N264	748 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	POGLUT1	Q8NBL1	392 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	FAM156A	Q8NDB6	213 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	DUSP19	Q8WTR2	217 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	WDR60	Q8WVS4	1066 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	FAM162A	Q96A26	154 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	SH3YL1	Q96HL8	342 aa	Predicted RBP	9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	UBL7	Q96S82	380 aa	Predicted RBP	9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	ANGPTL4	Q9BY76	406 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	ARMC7	Q9H6L4	198 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	GALNT9	Q9HCQ5	603 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	SH2D2A	Q9NP31	389 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	PPP4R1L	Q9P1A2	415 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	SEC14L3	Q9UDX4	400 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	EGFL7	Q9UHF1	273 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	BOK	Q9UMX3	212 aa	Predicted RBP	9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	ABCG2	Q9UNQ0	655 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	IFT52	Q9Y366	437 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	PCDHGA10	Q9Y5H3	936 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	MED13	Q9UHV7	2174 aa		9.3	□□□□□ -0.92
CPSF7-221	ENST00000543545	MAP1B	P46821	2468 aa	Known RBP	9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545		A0A0G2JMM0	328 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	CENPVL1	A0A0U1RR11	272 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545		A0A1W2PPB8	328 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545		A0A1W2PRS3	328 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	AGAP5	A6NIR3	686 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	KIR3DP1	A8MWS1	328 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	NPIPB9	F8W1W9	429 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	CXCR6	O00574	342 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	HCRTR2	O43614	444 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	RASAL1	O95294	804 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	CSTA	P01040	98 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	OPN1SW	P03999	348 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	HSD17B1	P14061	328 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	ENDOU	P21128	410 aa	Known RBP	9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	ME2	P23368	584 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	HTR1E	P28566	365 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	KDELR2	P33947	212 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	RFC3	P40938	356 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	CCR4	P51679	360 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	NCALD	P61601	193 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	KCNJ10	P78508	379 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	C17orf67	Q0P5P2	114 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	KLRB1	Q12918	225 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	TOMM20	Q15388	145 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	MAPK14	Q16539	360 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	SPATS1	Q496A3	300 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	SLC6A19	Q695T7	634 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	GLYAT	Q6IB77	296 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	APOOL	Q6UXV4	268 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	EIF3M	Q7L2H7	374 aa	Known RBP	9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	VRK2	Q86Y07	508 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	MISP	Q8IVT2	679 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	TMCO5A	Q8N6Q1	288 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	SMYD1	Q8NB12	490 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	OR2M7	Q8NG81	312 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	OR4K17	Q8NGC6	315 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	OR1J4	Q8NGS1	313 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	PNPLA2	Q96AD5	504 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	CCDC124	Q96CT7	223 aa	Known RBP	9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	WBP1	Q96G27	269 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	SCMH1	Q96GD3	660 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	CLPTM1L	Q96KA5	538 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	ZNF597	Q96LX8	424 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	HHATL	Q9HCP6	504 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	DEPP	Q9NTK1	212 aa		9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	TUBA8	Q9NY65	449 aa	Predicted RBP	9.29	□□□□□ -0.92
CPSF7-221	ENST00000543545	SUCO	Q9UBS9	1254 aa	Known RBP	9.29	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms