RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 RABL3Q5HYI8 236 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 RPS26P11Q5JNZ5 115 aaPredicted RBP5.77□□□□□ -1.49
LTBR-212ENST00000543542 EXOSC6Q5RKV6 272 aaKnown RBP5.77□□□□□ -1.49
LTBR-212ENST00000543542 PDZK1Q5T2W1 519 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 TIGD3Q6B0B8 471 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 TYW3Q6IPR3 259 aaKnown RBP5.77□□□□□ -1.49
LTBR-212ENST00000543542 HEPHL1Q6MZM0 1159 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 REEP3Q6NUK4 255 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 TMEM81Q6P7N7 255 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 C16orf89Q6UX73 402 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 GFRALQ6UXV0 394 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 FRRS1Q6ZNA5 592 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 LRRC74BQ6ZQY2 392 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 EIF3MQ7L2H7 374 aaKnown RBP5.77□□□□□ -1.49
LTBR-212ENST00000543542 PLCZ1Q86YW0 608 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 MISPQ8IVT2 679 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 FAM109AQ8N4B1 249 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 TMEM251Q8N6I4 163 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 FITM2Q8N6M3 262 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 ZFP62Q8NB50 900 aaPredicted RBP5.77□□□□□ -1.49
LTBR-212ENST00000543542 C11orf65Q8NCR3 313 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 OR8J3Q8NGG0 315 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 OR52P1PQ8NH57 321 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 OR14L1PQ8NHC6 308 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 B4GALNT2Q8NHY0 566 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 BBS10Q8TAM1 723 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 WDR60Q8WVS4 1066 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 FAR1Q8WVX9 515 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 NR4A3Q92570 626 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 MAL2Q969L2 176 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 ZNF607Q96SK3 696 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 HOPXQ9BPY8 73 aaPredicted RBP5.77□□□□□ -1.49
LTBR-212ENST00000543542 SPATA5L1Q9BVQ7 753 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 ZNF350Q9GZX5 532 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 QRSL1Q9H0R6 528 aaKnown RBP5.77□□□□□ -1.49
LTBR-212ENST00000543542 DSN1Q9H410 356 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 ARMC7Q9H6L4 198 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 MTHFD2LQ9H903 347 aaPredicted RBP5.77□□□□□ -1.49
LTBR-212ENST00000543542 SH2D2AQ9NP31 389 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 A4GALTQ9NPC4 353 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 ARL8BQ9NVJ2 186 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 NDE1Q9NXR1 346 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 ADA2Q9NZK5 511 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 MED11Q9P086 117 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 SLC13A4Q9UKG4 626 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 ZNF232Q9UNY5 417 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 NTNG1Q9Y2I2 539 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 AP3M1Q9Y2T2 418 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 PIEZO2Q9H5I5 2752 aa5.77□□□□□ -1.49
LTBR-212ENST00000543542 TRGV5A0A0B4J1U4 118 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 A0A1W2PQD3 144 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 SERINC4A6NH21 518 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 CCT8L1PA6NM43 557 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 B2RBV5 119 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 ALG1L2C9J202 215 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 SNPHO15079 494 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 ZNF264O43296 627 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 KIAA0513O60268 411 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 TRIM3O75382 744 aaPredicted RBP5.76□□□□□ -1.49
LTBR-212ENST00000543542 TNFRSF21O75509 655 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 SERPINB7O75635 380 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 UGT2B17O75795 530 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 C1QL1O75973 258 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 CBX6O95503 412 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 CSTAP01040 98 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 NGFRP08138 427 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 TFPTP0C1Z6 253 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 RFPL3SP0C7P2 107 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 UBTFL6P0CB48 400 aaPredicted RBP5.76□□□□□ -1.49
LTBR-212ENST00000543542 UBL4AP11441 157 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 EDN3P14138 238 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 UQCRBP14927 111 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 ABOP16442 354 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 HOXB9P17482 250 aaPredicted RBP5.76□□□□□ -1.49
LTBR-212ENST00000543542 HK1P19367 917 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 CALB2P22676 271 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 MST1P26927 711 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 DPP4P27487 766 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 AQP1P29972 269 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 PTGDSP41222 190 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 SLC7A2P52569 658 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 MVDP53602 400 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 CASP6P55212 293 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 DSCR4P56555 118 aaPredicted RBP5.76□□□□□ -1.49
LTBR-212ENST00000543542 PSME3P61289 254 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 RBBP4Q09028 425 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 KRT72Q14CN4 511 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 LIN52Q52LA3 116 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 KRTCAP3Q53RY4 240 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 ZNF311Q5JNZ3 666 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 WIPI1Q5MNZ9 446 aaPredicted RBP5.76□□□□□ -1.49
LTBR-212ENST00000543542 INTS11Q5TA45 600 aaKnown RBP5.76□□□□□ -1.49
LTBR-212ENST00000543542 RAET1LQ5VY80 246 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 ERICH5Q6P6B1 374 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 APOOLQ6UXV4 268 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 HACD2Q6Y1H2 254 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 BNC2Q6ZN30 1099 aaPredicted RBP5.76□□□□□ -1.49
LTBR-212ENST00000543542 TRPM8Q7Z2W7 1104 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 SERPINA11Q86U17 422 aa5.76□□□□□ -1.49
LTBR-212ENST00000543542 YRDCQ86U90 279 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms