RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 HOXC5Q00444 222 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 PDGFRLQ15198 375 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 FAM214AQ32MH5 1076 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 PYDC2Q56P42 97 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 YIF1BQ5BJH7 314 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 EXOSC6Q5RKV6 272 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 LCN1P1Q5VSP4 162 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 TIGD3Q6B0B8 471 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 MFSD12Q6NUT3 480 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 CDC73Q6P1J9 531 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 CNIH2Q6PI25 160 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF322Q6U7Q0 402 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 FRRS1Q6ZNA5 592 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 TMEM91Q6ZNR0 172 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 SHFQ7M4L6 423 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 GDF7Q7Z4P5 450 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 ADCK2Q7Z695 626 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 NOXA1Q86UR1 476 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 NRROSQ86YC3 692 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 GATAD2AQ86YP4 633 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 NKAIN4Q8IVV8 208 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 FAM20CQ8IXL6 584 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 TCTE3Q8IZS6 198 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 FBXL6Q8N531 539 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 ASCC1Q8N9N2 400 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 ATP6V1C2Q8NEY4 427 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 OR4F15Q8NGB8 312 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 OR52E1Q8NGJ3 308 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 OR9A2Q8NGT5 310 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 MAFAQ8NHW3 353 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 BRIX1Q8TDN6 353 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 GANCQ8TET4 914 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 KLK6Q92876 244 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 SMARCD2Q92925 531 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 FAM131CQ96AQ9 280 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC35A4Q96G79 324 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 SCARF2Q96GP6 870 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 RIPOR3Q96MK2 946 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 TIMP4Q99727 224 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 MACROD1Q9BQ69 325 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 TMEM43Q9BTV4 400 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 RNF32Q9H0A6 362 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 WDR26Q9H7D7 661 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 TRPV4Q9HBA0 871 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 PHPT1Q9NRX4 125 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 GIMAP4Q9NUV9 329 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 LYARQ9NX58 379 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 OBP2AQ9NY56 170 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 CNIH4Q9P003 139 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 KLHL21Q9UJP4 597 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 ZFR2Q9UPR6 939 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 OR1A2Q9Y585 309 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 NOX1Q9Y5S8 564 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 CDH10Q9Y6N8 788 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 CKAP5Q14008 2032 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 CUL9Q8IWT3 2517 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TBC1D3KA0A087X1G2 549 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 LINC00854A0A1B0GVQ3 168 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 DCDC2BA2VCK2 349 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TBC1D3BA6NDS4 549 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TBC1D3FA6NER0 549 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 DUXAA6NLW8 204 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 A8MV72 311 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SGK494L7N484 410 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 GABRPO00591 440 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 CASKO14936 926 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 TFECO14948 347 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ATXN7O15265 892 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 MID1O15344 667 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 FCMRO60667 390 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 HPGDSO60760 199 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 PCDH8O95206 1070 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 LYPD3O95274 346 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 AGR2O95994 175 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 STATHP02808 62 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 HMGN1P05114 100 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 YES1P07947 543 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 CHRM5P08912 532 aaPredicted RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ZGLP1P0C6A0 271 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 C8orf89P0DMQ9 161 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 SMIM10L1P0DMW3 83 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 FOSL2P15408 326 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF24P17028 368 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 CD53P19397 219 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 C5AR1P21730 350 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 RPS4Y1P22090 263 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ALAS2P22557 587 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 FCARP24071 287 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 IFNA8P32881 189 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 MAP2K3P46734 347 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF136P52737 540 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 PDX1P52945 283 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 CAV3P56539 151 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 EEF1A1P68104 462 aaKnown RBP4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 PLAURQ03405 335 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 P2RY14Q15391 338 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 CST6Q15828 149 aa4.83□□□□□ -1.64
ATPAF1-212ENST00000542495 RPE65Q16518 533 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms