RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 C12orf66Q96MD2 445 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 ALG8Q9BVK2 526 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.67□□□□□ -0.862e-6■■□□□ 13.9
CDC42SE1-207ENST00000540998 AUNIPQ9H7T9 357 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 FBXO34Q9NWN3 711 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC13A4Q9UKG4 626 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 SPEF1Q9Y4P9 236 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 FGF18O76093 207 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 THBS2P35442 1172 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 TSPAN31Q12999 210 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZNF267Q14586 743 aaPredicted RBP9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 PGGHGQ32M88 737 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 PLA1AQ53H76 456 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 PLPP4Q5VZY2 271 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 FAAP20Q6NZ36 180 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 LCTLQ6UWM7 567 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 THSD4Q6ZMP0 1018 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 GDF7Q7Z4P5 450 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 FBXL6Q8N531 539 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 POGLUT1Q8NBL1 392 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 RASSF5Q8WWW0 418 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 RFT1Q96AA3 541 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 DEFB118Q96PH6 123 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 MCHR1Q99705 422 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 CHIAQ9BZP6 476 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZCCHC2Q9C0B9 1178 aaKnown RBP9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 NIPAL2Q9H841 368 aa9.67□□□□□ -0.86
CDC42SE1-207ENST00000540998 LRIT2A6NDA9 550 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 J3QLW9 94 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 PSMD9O00233 223 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 MAN2B1O00754 1011 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 IMPA2O14732 288 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 GNB5O14775 395 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 PROM1O43490 865 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 CHST10O43529 356 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 FGBP02675 491 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZNF19P17023 458 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 ITGB8P26012 769 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 FRKP42685 505 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 TM4SF4P48230 202 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZNF81P51508 661 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 EPHA5P54756 1037 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR12D2P58182 307 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 ERVFC1P60507 584 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 RPL6Q02878 288 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 FNDC3BQ53EP0 1204 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 RNLSQ5VYX0 342 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 CXXC5Q7LFL8 322 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 CEACAM19Q7Z692 300 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 DCUN1D3Q8IWE4 304 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 HOMEZQ8IX15 550 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZNF680Q8NEM1 530 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 TRMT10AQ8TBZ6 339 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 CDS1Q92903 461 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 KIAA1143Q96AT1 154 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 MSANTD3Q96H12 275 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZC3HAV1LQ96H79 300 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 FERD3LQ96RJ6 166 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 MENTQ9BUN1 341 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 GTPBP2Q9BX10 602 aaKnown RBP9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 TRAV27A0A087WT01 109 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 A0A0A6YYD5 115 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 MPC2O95563 127 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 IL9P15248 144 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 MAKP20794 623 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 MAPK9P45984 424 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 KHKP50053 298 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 PER3P56645 1201 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 GPR68Q15743 365 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 MLF2Q15773 248 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZBTB37Q5TC79 503 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 SFRP4Q6FHJ7 346 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 CD300LDQ6UXZ3 194 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZNF620Q6ZNG0 422 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 C16orf62Q7Z3J2 963 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 SIAH3Q8IW03 269 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR51A7Q8NH64 312 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 PIGXQ8TBF5 258 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 GNPDA2Q8TDQ7 276 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 UBE2E3Q969T4 207 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 PEX11GQ96HA9 241 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 UBQLN3Q9H347 655 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 SPHK1Q9NYA1 384 aa9.66□□□□□ -0.86
CDC42SE1-207ENST00000540998 TRBV23OR9-2A0A075B6M9 112 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 IGLON5A6NGN9 336 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 HPXP02790 462 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 RHOP08100 348 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 ADRB3P13945 408 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 NTSP30990 170 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 SIM1P81133 766 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 C19orf57Q0VDD7 668 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 TMEM255AQ5JRV8 349 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 SFXN4Q6P4A7 337 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 CREB3L2Q70SY1 520 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 GRASPQ7Z6J2 395 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 SERPINA12Q8IW75 414 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 ACOT4Q8N9L9 421 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 KCT2Q8NC54 265 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 NUP43Q8NFH3 380 aa9.65□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR13C2Q8NGS9 318 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms