RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 CDX4O14627 284 aaPredicted RBP11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 OIP5O43482 229 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 OXSR1O95747 527 aaPredicted RBP11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 ADAP00813 363 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 ZGLP1P0C6A0 271 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 GABRB1P18505 474 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 POU1F1P28069 291 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 KRT20P35900 424 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 CRISP1P54107 249 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 TRAM2Q15035 370 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 PTGES3Q15185 160 aaKnown RBP11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 ELAVL1Q15717 326 aaKnown RBP11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 RBM48Q5RL73 367 aaKnown RBP11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 IQCF1Q8N6M8 205 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 OR7G1Q8NGA0 311 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 FAM81AQ8TBF8 368 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 TMEM255BQ8WV15 326 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNF578Q96N58 590 aaPredicted RBP11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 DGCR6LQ9BY27 220 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 YTHDF1Q9BYJ9 559 aaKnown RBP11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 LIN28AQ9H9Z2 209 aaKnown RBP11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNF556Q9HAH1 456 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 Q9N2J8 555 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 POLE3Q9NRF9 147 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 KLHL28Q9NXS3 571 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 CNIH4Q9P003 139 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNF223Q9UK11 482 aaPredicted RBP11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 SLC7A7Q9UM01 511 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 MGAT4BQ9UQ53 548 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 RALGAPA1Q6GYQ0 2036 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 TEX51A0A1B0GUA7 166 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 ZAR1LA6NP61 321 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 ANGPTL1O95841 491 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 CD59P13987 128 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 GRK6P43250 576 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 IDH2P48735 452 aaKnown RBP11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 DUSP3P51452 185 aaPredicted RBP11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 UGT2B15P54855 530 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 NR1H2P55055 460 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 SMIM11AP58511 58 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 TUBA4AP68366 448 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 OR1Q1Q15612 314 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNF141Q15928 474 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 EIPR1Q53HC9 387 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 RBM44Q6ZP01 1051 aaKnown RBP11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 KCTD8Q6ZWB6 473 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 PPP1R3BQ86XI6 285 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 PLPP5Q8NEB5 264 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 RHBDD1Q8TEB9 315 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 PLA2G12AQ9BZM1 189 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 TGIF2Q9GZN2 237 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 ERVK-18Q9QC07 812 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 PRODH2Q9UF12 536 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 OR10H1Q9Y4A9 318 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 PCDHGA10Q9Y5H3 936 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 CLCA3PQ9Y6N3 262 aa11.32□□□□□ -0.6
AP003559.1-201ENST00000540906 WDFY3Q8IZQ1 3526 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 CACNA1HO95180 2353 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 VGLL3A8MV65 326 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 IDSB3KWA1 339 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 PTGES3LE9PB15 166 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 H3BSA7 217 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 AP3D1O14617 1153 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 OR5F1O95221 314 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNF883P0CG24 379 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 FGF5P12034 268 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 OSMP13725 252 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 DRD5P21918 477 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 ACP1P24666 158 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 ACAA2P42765 397 aaKnown RBP11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 OMPP47874 163 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 GPR143P51810 404 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 PMS2P3Q13401 168 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 EBPQ15125 230 aaKnown RBP11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 C1orf94Q6P1W5 598 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 FAM199XQ6PEV8 388 aaPredicted RBP11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNF773Q6PK81 442 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 APOOLQ6UXV4 268 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 C16orf47Q6ZP98 133 aaPredicted RBP11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 ANKRD37Q7Z713 158 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 GATSQ8NAP1 163 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 SETD9Q8NE22 299 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 OR8D4Q8NGM9 314 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 ZNF524Q96C55 264 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 FAM46AQ96IP4 442 aaKnown RBP11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 LOXL4Q96JB6 756 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 SLC46A1Q96NT5 459 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 GAL3ST4Q96RP7 486 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 APOL4Q9BPW4 351 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 RTN4RQ9BZR6 473 aa11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 POLR2J3Q9H1A7 115 aaKnown RBP11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 TRIM45Q9H8W5 580 aaPredicted RBP11.31□□□□□ -0.6
AP003559.1-201ENST00000540906 HEATR5AQ86XA9 2040 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 VSTM2BA6NLU5 285 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 GUSBP08236 651 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 ADRA2AP08913 450 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 FUT1P19526 365 aa11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 EEF1B2P24534 225 aaKnown RBP11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 CSTF2P33240 577 aaKnown RBP eCLIP11.3□□□□□ -0.6
AP003559.1-201ENST00000540906 PPICP45877 212 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms