RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 HK1P19367 917 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 MATN1P21941 496 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 S100A3P33764 101 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 CDKN2CP42773 168 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 CLK3P49761 638 aaKnown RBP13.64□□□□□ -0.23
UBE3B-212ENST00000540230 PPP2R2AP63151 447 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 SRYQ05066 204 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 TFF3Q07654 80 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 C17orf67Q0P5P2 114 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 ITPR2Q14571 2701 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 DPY19L1Q2PZI1 675 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.64□□□□□ -0.23
UBE3B-212ENST00000540230 RIPPLY2Q5TAB7 128 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 ANXA8L1Q5VT79 327 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 CSMD2Q7Z408 3487 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 GOLGA6L1Q8N7Z2 621 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 OR9I1Q8NGQ6 314 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 ASB5Q8WWX0 329 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 MARVELD3Q96A59 401 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 C1GALT1C1Q96EU7 318 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 SLC35G5Q96KT7 338 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 DOCK7Q96N67 2140 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 TRIB1Q96RU8 372 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 TUBA1CQ9BQE3 449 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 EBF4Q9BQW3 602 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 INPP5KQ9BT40 448 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 SDHAF3Q9NRP4 125 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 ZNF446Q9NWS9 450 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 DCHS2Q6V1P9 2916 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 NDUFB5O43674 189 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 PGRP06401 933 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 HOXD4P09016 255 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-212ENST00000540230 CPN1P15169 458 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 PTGER4P35408 488 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 CLDN18P56856 261 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 PDCD4Q53EL6 469 aaKnown RBP13.64□□□□□ -0.23
UBE3B-212ENST00000540230 RAET1LQ5VY80 246 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 EPGNQ6UW88 154 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 ARSKQ6UWY0 536 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 SH3YL1Q96HL8 342 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-212ENST00000540230 CCDC115Q96NT0 180 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 OR51I1Q9H343 314 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 CHST11Q9NPF2 352 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 NPDC1Q9NQX5 325 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-212ENST00000540230 UBQLN4Q9NRR5 601 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 INTS9Q9NV88 658 aaKnown RBP13.64□□□□□ -0.23
UBE3B-212ENST00000540230 PCDHGB4Q9UN71 923 aa13.64□□□□□ -0.23
UBE3B-212ENST00000540230 INTS1Q8N201 2190 aaKnown RBP13.63□□□□□ -0.23
UBE3B-212ENST00000540230 CENPVL1A0A0U1RR11 272 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 NPIPB9F8W1W9 429 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 H0YC42 278 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 OIP5O43482 229 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 KRT16P08779 473 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 IDO1P14902 403 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 ZNF708P17019 499 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 UQCRC2P22695 453 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 CHMP24386 653 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 CEACAM8P31997 349 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-212ENST00000540230 TPD52P55327 224 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-212ENST00000540230 CLDN15P56746 228 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 FUT5Q11128 374 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 NSUN5P2Q63ZY6 315 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 SAXO2Q658L1 398 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 TNFAIP8L2Q6P589 184 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-212ENST00000540230 AAGABQ6PD74 315 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 ENPP6Q6UWR7 440 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 ADGRE4PQ86SQ3 457 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 LACC1Q8IV20 430 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 C9orf106Q8NAJ2 232 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 RELL2Q8NC24 303 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-212ENST00000540230 GOT1L1Q8NHS2 421 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-212ENST00000540230 DYDC1Q8WWB3 177 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 RAB8BQ92930 207 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 OR52E6Q96RD3 313 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 SDF2Q99470 211 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 SLC6A13Q9NSD5 602 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 BTNL2Q9UIR0 455 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 VDAC3Q9Y277 283 aa13.63□□□□□ -0.23
UBE3B-212ENST00000540230 A0A1W2PQD3 144 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 OR2M5A3KFT3 312 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 CD8B2A6NJW9 211 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 H0Y3Z8 333 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 SCDO00767 359 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 UBDO15205 165 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 HNRNPRO43390 633 aaKnown RBP13.62□□□□□ -0.23
UBE3B-212ENST00000540230 GSNP06396 782 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 OR12D1P0DN82 309 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 ATP6V1C1P21283 382 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 LCN1P31025 176 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 GCKP35557 465 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 IDH3AP50213 366 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 ZNF136P52737 540 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 GANABQ14697 944 aaKnown RBP13.62□□□□□ -0.23
UBE3B-212ENST00000540230 NDUFAF6Q330K2 333 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 FLYWCH1Q4VC44 716 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 BHLHB9Q6PI77 547 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 POMZP3Q6PJE2 187 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 UBQLNLQ8IYU4 475 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 ACBD4Q8NC06 268 aa13.62□□□□□ -0.23
UBE3B-212ENST00000540230 CHDHQ8NE62 594 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms