RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ZXDBP98169 803 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 RBBP4Q09028 425 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 KRT33BQ14525 404 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 PCBP2Q15366 365 aaKnown RBP eCLIP8.16□□□□□ -1.1
DDB1-217ENST00000540166 NDUFAF6Q330K2 333 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 PMS2CLQ68D20 193 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 PAQR6Q6TCH4 344 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 LYPD4Q6UWN0 246 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 TMEM92Q6UXU6 159 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 Q6ZVU0 165 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 ZER1Q7Z7L7 766 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 TMEM150AQ86TG1 271 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 TEX26Q8N6G2 289 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 MRGPRX1Q96LB2 322 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 RBP7Q96R05 134 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 IMP3Q9NV31 184 aaKnown RBP8.16□□□□□ -1.1
DDB1-217ENST00000540166 KCTD5Q9NXV2 234 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 URB1O60287 2271 aaKnown RBP8.16□□□□□ -1.1
DDB1-217ENST00000540166 SYNDIG1LA6NDD5 238 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 LRRN3E7EW58 273 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 EFEMP2O95967 443 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 PEX11BO96011 259 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 CD38P28907 300 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 GRK6P43250 576 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 BLKP51451 505 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 CLCNKAP51800 687 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 CDK6Q00534 326 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 LINGO2Q7L985 606 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 ABI3BPQ7Z7G0 1075 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 CALHM3Q86XJ0 350 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 KLHL36Q8N4N3 616 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 SCARB1Q8WTV0 552 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 ADAMTS14Q8WXS8 1223 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 MTERF1Q99551 399 aaKnown RBP8.16□□□□□ -1.1
DDB1-217ENST00000540166 FNDC11Q9BVV2 318 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 BOCQ9BWV1 1114 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 LRRN3Q9H3W5 708 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 ZNF282Q9UDV7 671 aaPredicted RBP8.16□□□□□ -1.1
DDB1-217ENST00000540166 OTOGLQ3ZCN5 2332 aa8.16□□□□□ -1.1
DDB1-217ENST00000540166 ABCA7Q8IZY2 2146 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 SPAARA0A1B0GVQ0 90 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 OTOL1A6NHN0 477 aaPredicted RBP8.15□□□□□ -1.1
DDB1-217ENST00000540166 TTLL8A6PVC2 850 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 D6RAR5 112 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 SGK494L7N484 410 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 OR7A17O14581 309 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 GPR171O14626 319 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 TPST2O60704 377 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 PDYNP01213 254 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 NUDT7P0C024 238 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 OSMP13725 252 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 CD70P32970 193 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 BDKRB1P46663 353 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 CLCN7P51798 805 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 CNTN1Q12860 1018 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 CHIT1Q13231 466 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 IHHQ14623 411 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 TRIP6Q15654 476 aaKnown RBP8.15□□□□□ -1.1
DDB1-217ENST00000540166 XKR6Q5GH73 641 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 CRB2Q5IJ48 1285 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 CTSL3PQ5NE16 218 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 LRIF1Q5T3J3 769 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 SLC22A10Q63ZE4 541 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 ADNP2Q6IQ32 1131 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 NOXRED1Q6NXP6 359 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 B3GLCTQ6Y288 498 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 C12orf40Q86WS4 652 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 NANOGP1Q8N7R0 232 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 ZNF527Q8NB42 609 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 FIBINQ8TAL6 211 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 SLC38A3Q99624 504 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 OR10A4Q9H209 315 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 PLEKHB1Q9UF11 243 aaPredicted RBP8.15□□□□□ -1.1
DDB1-217ENST00000540166 NDRG3Q9UGV2 375 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 PCDHGA9Q9Y5G4 932 aaKnown RBP8.15□□□□□ -1.1
DDB1-217ENST00000540166 PLXNA4Q9HCM2 1894 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 TCRBV16S1A1N1A0A5B0 115 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 OR6C74A6NCV1 312 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 PRRT4C9JH25 899 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 SIGLEC6O43699 453 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 REM1O75628 298 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 B3GALT4O96024 378 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 CFDP00746 253 aaPredicted RBP8.15□□□□□ -1.1
DDB1-217ENST00000540166 ANXA4P09525 319 aaPredicted RBP8.15□□□□□ -1.1
DDB1-217ENST00000540166 CXCL3P19876 107 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 SERPINA4P29622 427 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 P2RY2P41231 377 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 ARL4DP49703 201 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 GINS1Q14691 196 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 KCT2Q8NC54 265 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 OR56B4Q8NH76 319 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 THAP6Q8TBB0 222 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 C2CD4CQ8TF44 421 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 CMTM7Q96FZ5 175 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 AHCYL2Q96HN2 611 aaKnown RBP8.15□□□□□ -1.1
DDB1-217ENST00000540166 FCRL4Q96PJ5 515 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 ARHGAP9Q9BRR9 750 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 DUSP15Q9H1R2 295 aaPredicted RBP8.15□□□□□ -1.1
DDB1-217ENST00000540166 COMMD9Q9P000 198 aa8.15□□□□□ -1.1
DDB1-217ENST00000540166 TRPS1Q9UHF7 1281 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms