RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SUN3Q8TAQ9 357 aa9.38□□□□□ -0.91
TRAF1-202ENST00000540010 HYLS1Q96M11 299 aa9.38□□□□□ -0.91
TRAF1-202ENST00000540010 THSD1Q9NS62 852 aa9.38□□□□□ -0.91
TRAF1-202ENST00000540010 ALPK3Q96L96 1907 aa9.38□□□□□ -0.91
TRAF1-202ENST00000540010 TCF20Q9UGU0 1960 aaKnown RBP9.37□□□□□ -0.91
TRAF1-202ENST00000540010 KANTRA0A1W2PQU2 76 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 FAM171A2A8MVW0 826 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 EIF1AYO14602 144 aaKnown RBP9.37□□□□□ -0.91
TRAF1-202ENST00000540010 ETHE1O95571 254 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 SLC6A6P31641 620 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 GIPRP48546 466 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 GAS6Q14393 721 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 LRIT3Q3SXY7 679 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 TMEM69Q5SWH9 247 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 XKRXQ6PP77 449 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 KCTD9Q7L273 389 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 TMPRSS9Q7Z410 1059 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 TMPRSS12Q86WS5 348 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 SERPINA12Q8IW75 414 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 ZNF101Q8IZC7 436 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 SPERTQ8NA61 448 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 CAMKVQ8NCB2 501 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 OR4F15Q8NGB8 312 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 HMGB4Q8WW32 186 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 COX14Q96I36 57 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 UHRF1Q96T88 793 aaPredicted RBP9.37□□□□□ -0.91
TRAF1-202ENST00000540010 SPATA6Q9NWH7 488 aaPredicted RBP9.37□□□□□ -0.91
TRAF1-202ENST00000540010 EMC8O43402 210 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 SLC19A2O60779 497 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 GYPBP06028 91 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 HTR1AP08908 422 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 CD3GP09693 182 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 CXCR1P25024 350 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 IL12BP29460 328 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 AHRP35869 848 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 CASP3P42574 277 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 OR3A3P47888 321 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 OR3A2P47893 321 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 CLDN2P57739 230 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 METRNLQ641Q3 311 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 OLIG3Q7RTU3 272 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 KLHDC8AQ8IYD2 350 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 TDHQ8IZJ6 230 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 METTL27Q8N6F8 245 aaPredicted RBP9.37□□□□□ -0.91
TRAF1-202ENST00000540010 IL17RCQ8NAC3 791 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 SLC38A3Q99624 504 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 ZNF471Q9BX82 626 aaPredicted RBP9.37□□□□□ -0.91
TRAF1-202ENST00000540010 DPH1Q9BZG8 443 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 DMRT3Q9NQL9 472 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 SLC25A37Q9NYZ2 338 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 SH2B3Q9UQQ2 575 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 PCYT1BQ9Y5K3 369 aaPredicted RBP9.37□□□□□ -0.91
TRAF1-202ENST00000540010 SCN8AQ9UQD0 1980 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 DNAJC13O75165 2243 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 OR52A4PA6NMU1 304 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 C11orf98E9PRG8 122 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 ZNF806P0C7X5 589 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 ACPPP15309 386 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 APEX1P27695 318 aaKnown RBP9.37□□□□□ -0.91
TRAF1-202ENST00000540010 PSMB5P28074 263 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 FXYD6P3P58550 94 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 HYAL4Q2M3T9 481 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 AGAP7PQ5VUJ5 663 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 IL20RBQ6UXL0 311 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 GID4Q8IVV7 300 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 OR5M3Q8NGP4 307 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 OR5K2Q8NHB8 316 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 ASB12Q8WXK4 309 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 CREB3L1Q96BA8 519 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 APOOQ9BUR5 198 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 SGPP1Q9BX95 441 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 TBL1XR1Q9BZK7 514 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 RANBP3Q9H6Z4 567 aaPredicted RBP9.37□□□□□ -0.91
TRAF1-202ENST00000540010 FOLH1BQ9HBA9 442 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 TREM1Q9NP99 234 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 A0A0G2JPF8 293 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 TRBV4-1A0A0J9YWV2 114 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 CENPBD1B2RD01 187 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 HNRNPCL3B7ZW38 293 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 RNASET2O00584 256 aaKnown RBP9.37□□□□□ -0.91
TRAF1-202ENST00000540010 RBBP9O75884 186 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 PRH1P02810 166 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 HNRNPCL4P0DMR1 293 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 KIR2DL1P43626 348 aaPredicted RBP9.37□□□□□ -0.91
TRAF1-202ENST00000540010 HNRNPFP52597 415 aaKnown RBP9.37□□□□□ -0.91
TRAF1-202ENST00000540010 ADPRHP54922 357 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 GP2P55259 537 aaKnown RBP9.37□□□□□ -0.91
TRAF1-202ENST00000540010 SEC23BQ15437 767 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 TMEM31Q5JXX7 168 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 GDPGP1Q6ZNW5 385 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 SYT14Q8NB59 555 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 OR2L3Q8NG85 312 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 OR52E2Q8NGJ4 325 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 FCAMRQ8WWV6 532 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 MNTQ99583 582 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 QRSL1Q9H0R6 528 aaKnown RBP9.37□□□□□ -0.91
TRAF1-202ENST00000540010 SEC61A2Q9H9S3 476 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 Q9N2J8 555 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 UBQLN2Q9UHD9 624 aa9.37□□□□□ -0.91
TRAF1-202ENST00000540010 ZNF639Q9UID6 485 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms