RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 NXF5Q9H1B4 397 aaKnown RBP10.88□□□□□ -0.67
VTN-202ENST00000539746 RIMS3Q9UJD0 308 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 FBXL4Q9UKA2 621 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 SPIN1Q9Y657 262 aaPredicted RBP10.88□□□□□ -0.67
VTN-202ENST00000539746 V9GYQ6 96 aa10.88□□□□□ -0.67
VTN-202ENST00000539746 ASCC3Q8N3C0 2202 aaKnown RBP10.88□□□□□ -0.67
VTN-202ENST00000539746 TRAPPC13A5PLN9 417 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 AGRPO00253 132 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 SOCS6O14544 535 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 RRP8O43159 456 aaKnown RBP10.87□□□□□ -0.67
VTN-202ENST00000539746 CCNB2O95067 398 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 SNX4O95219 450 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 RASAL1O95294 804 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 UTS2O95399 124 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 FBXO45P0C2W1 286 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 LINGO3P0C6S8 592 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 ALDH3A2P51648 485 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 HMGA2P52926 109 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 EEF1A1P68104 462 aaKnown RBP10.87□□□□□ -0.67
VTN-202ENST00000539746 GANABQ14697 944 aaKnown RBP10.87□□□□□ -0.67
VTN-202ENST00000539746 NPTX1Q15818 432 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.87□□□□□ -0.67
VTN-202ENST00000539746 KLHL26Q53HC5 615 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 RPS26P11Q5JNZ5 115 aaPredicted RBP10.87□□□□□ -0.67
VTN-202ENST00000539746 TTC23Q5W5X9 447 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 PPP4R4Q6NUP7 873 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 RPL13AP3Q6NVV1 102 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 ULK3Q6PHR2 472 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 DEF8Q6ZN54 512 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 DGAT2L6Q6ZPD8 337 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 PPP1R32Q7Z5V6 425 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 LRTOMTQ8WZ04 291 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 FGF11Q92914 225 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 SPACA9Q96E40 222 aaPredicted RBP10.87□□□□□ -0.67
VTN-202ENST00000539746 C7orf34Q96L11 122 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 PKP2Q99959 881 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 PSD2Q9BQI7 771 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 TMEM121BQ9BXQ6 578 aaPredicted RBP10.87□□□□□ -0.67
VTN-202ENST00000539746 LAT2Q9GZY6 243 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 GABARAPL1Q9H0R8 117 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 METTL7AQ9H8H3 244 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 ZNF160Q9HCG1 818 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 ASCL3Q9NQ33 180 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 HPF1Q9NWY4 346 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 DLL3Q9NYJ7 618 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 NDUFAF4Q9P032 175 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 RAB26Q9ULW5 256 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 MGAT4BQ9UQ53 548 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 POLHQ9Y253 713 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 CROCCQ5TZA2 2017 aa10.87□□□□□ -0.67
VTN-202ENST00000539746 A0A087WZY1 265 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 ANKRD33BA6NCL7 494 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 NPIPB9F8W1W9 429 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 TSPAN2O60636 221 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 FCMRO60667 390 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 ADAP00813 363 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 OPN1SWP03999 348 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 CLPSP04118 112 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 ELAVL4P26378 380 aaKnown RBP10.86□□□□□ -0.67
VTN-202ENST00000539746 EVI2BP34910 448 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 EIF1P41567 113 aaKnown RBP10.86□□□□□ -0.67
VTN-202ENST00000539746 FUT5Q11128 374 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 IL18R1Q13478 541 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 NTRK2Q16620 822 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 DUSP7Q16829 419 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 ANKDD1AQ495B1 522 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 PDZK1Q5T2W1 519 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 MRPL2Q5T653 305 aaKnown RBP10.86□□□□□ -0.67
VTN-202ENST00000539746 WBP2NLQ6ICG8 309 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 RTL4Q6ZR62 310 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 TIPARPQ7Z3E1 657 aaKnown RBP10.86□□□□□ -0.67
VTN-202ENST00000539746 VTCN1Q7Z7D3 282 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 C10orf111Q8N326 155 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 LSMEM1Q8N8F7 131 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 ATG16L2Q8NAA4 619 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 SETD9Q8NE22 299 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 PHOSPHO1Q8TCT1 267 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 GIPC3Q8TF64 312 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 KCNE4Q8WWG9 221 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 SLCO4A1Q96BD0 722 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 ADOQ96SZ5 270 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 MCHR1Q99705 422 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 WDR77Q9BQA1 342 aaPredicted RBP10.86□□□□□ -0.67
VTN-202ENST00000539746 CPNE5Q9HCH3 593 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 TIMMDC1Q9NPL8 285 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 SACM1LQ9NTJ5 587 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 SMPD3Q9NY59 655 aaPredicted RBP10.86□□□□□ -0.67
VTN-202ENST00000539746 USE1Q9NZ43 259 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 KLRF1Q9NZS2 232 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 B4GALT7Q9UBV7 327 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 ACAD8Q9UKU7 415 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 USP22Q9UPT9 525 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 POFUT2Q9Y2G5 429 aa10.86□□□□□ -0.67
VTN-202ENST00000539746 SCN3AQ9NY46 2000 aa10.85□□□□□ -0.67
VTN-202ENST00000539746 MUC6Q6W4X9 2439 aa10.85□□□□□ -0.67
VTN-202ENST00000539746 MYOCOSA0A1B0GUC4 107 aa10.85□□□□□ -0.67
VTN-202ENST00000539746 GXYLT2A0PJZ3 443 aa10.85□□□□□ -0.67
VTN-202ENST00000539746 PRAMEF25A6NGN4 478 aa10.85□□□□□ -0.67
VTN-202ENST00000539746 H0YAE9 185 aa10.85□□□□□ -0.67
VTN-202ENST00000539746 hCG_2039718K7EN88 272 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms