RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 SF3B6Q9Y3B4 125 aaKnown RBP8.61□□□□□ -1.03
DDB1-211ENST00000538280 CDH10Q9Y6N8 788 aa8.61□□□□□ -1.03
DDB1-211ENST00000538280 AKAP13Q12802 2813 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 LOC105369274A0A096LPK9 316 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 LOC102723532A0A0G2JNH3 316 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 A0A0J9YY10 115 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 PNMA8CA0A1B0GUJ8 204 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 IQCMA0A1B0GVH7 501 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 OR6C74A6NCV1 312 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 OR5K4A6NMS3 321 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 SNTNA6NMZ2 147 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 C2orf74A8MZ97 194 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 H0YGG7 62 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 CYR61O00622 381 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 AP3D1O14617 1153 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 SURF4O15260 269 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 ZSCAN9O15535 394 aaPredicted RBP8.6□□□□□ -1.03
DDB1-211ENST00000538280 FRS3O43559 492 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 FMO6PO60774 539 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 MED26O95402 600 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 PTTG1O95997 202 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 AK1P00568 194 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 IL1AP01583 271 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 GABRG2P18507 467 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 POLR2CP19387 275 aaPredicted RBP8.6□□□□□ -1.03
DDB1-211ENST00000538280 SDHBP21912 280 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 PSMA1P25786 263 aaKnown RBP8.6□□□□□ -1.03
DDB1-211ENST00000538280 TLX1P31314 330 aaPredicted RBP8.6□□□□□ -1.03
DDB1-211ENST00000538280 IFNA8P32881 189 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 S100A5P33763 92 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 SOX3P41225 446 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 RABIFP47224 123 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 CCR5P51681 352 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 WNT4P56705 351 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 ARF3P61204 181 aaPredicted RBP8.6□□□□□ -1.03
DDB1-211ENST00000538280 SIM1P81133 766 aaPredicted RBP8.6□□□□□ -1.03
DDB1-211ENST00000538280 ACSM1Q08AH1 577 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 CSRP2Q16527 193 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 SNAPC1Q16533 368 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 PGGHGQ32M88 737 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 DEFB134Q4QY38 66 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 STEAP3Q658P3 488 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 CD200R1LQ6Q8B3 271 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 KIAA1324Q6UXG2 1013 aaKnown RBP8.6□□□□□ -1.03
DDB1-211ENST00000538280 ZNF730Q6ZMV8 503 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 ZNF620Q6ZNG0 422 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 PLEKHM3Q6ZWE6 761 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 RBM12BQ8IXT5 1001 aaKnown RBP8.6□□□□□ -1.03
DDB1-211ENST00000538280 PEX5LQ8IYB4 626 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 OR4N4Q8N0Y3 316 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 CADM3Q8N126 398 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 CACTIN-AS1Q8N1I8 211 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 CA13Q8N1Q1 262 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 ZNF619Q8N2I2 560 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 ARHGEF39Q8N4T4 335 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 FAM83FQ8NEG4 500 aaPredicted RBP8.6□□□□□ -1.03
DDB1-211ENST00000538280 ANKK1Q8NFD2 765 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 OR9Q1Q8NGQ5 310 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 TM9SF4Q92544 642 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 FAM46AQ96IP4 442 aaKnown RBP8.6□□□□□ -1.03
DDB1-211ENST00000538280 SLC38A2Q96QD8 506 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 NELL2Q99435 816 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 ZNF649Q9BS31 505 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 CCDC32Q9BV29 185 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 PRR14Q9BWN1 585 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 POLE3Q9NRF9 147 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 DUSP22Q9NRW4 184 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 CNIH4Q9P003 139 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 KLHL3Q9UH77 587 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 MMP17Q9ULZ9 603 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 MRPS17Q9Y2R5 130 aaKnown RBP8.6□□□□□ -1.03
DDB1-211ENST00000538280 WDR45Q9Y484 360 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 PCDHGB6Q9Y5F9 930 aa8.6□□□□□ -1.03
DDB1-211ENST00000538280 CACNA1GO43497 2377 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 TNRC6BQ9UPQ9 1833 aaKnown RBP8.59□□□□□ -1.03
DDB1-211ENST00000538280 KIR2DS5A0A0G2JLQ3 304 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 A0A0G2JNG1 304 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 CENPVL1A0A0U1RR11 272 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 J3QRE1 110 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 KIR2DS3K7RE56 304 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 TM4SF5O14894 197 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 AQP9O43315 295 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 TBX1O43435 398 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 FGF17O60258 216 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 PIP5K1CO60331 668 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 GALR3O60755 368 aaPredicted RBP8.59□□□□□ -1.03
DDB1-211ENST00000538280 NTN1O95631 604 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 GPR75O95800 540 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 TNFP01375 233 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 IGHA1P01876 353 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 IGHV4-34P06331 123 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 DBIP07108 87 aaKnown RBP8.59□□□□□ -1.03
DDB1-211ENST00000538280 LIMS3P0CW19 117 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 LIMS4P0CW20 117 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 GNSP15586 552 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 RPS19P39019 145 aaKnown RBP8.59□□□□□ -1.03
DDB1-211ENST00000538280 AVPR1BP47901 424 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 CXCL12P48061 93 aa8.59□□□□□ -1.03
DDB1-211ENST00000538280 RAB38P57729 211 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms