RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 UNKQ9C0B0 810 aaKnown RBP3.32□□□□□ -1.88
PTPN22-211ENST00000538253 WDR12Q9GZL7 423 aaKnown RBP3.32□□□□□ -1.88
PTPN22-211ENST00000538253 OR10A5Q9H207 317 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 PIGUQ9H490 435 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 NARFLQ9H6Q4 476 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 EXO5Q9H790 373 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 IL1RL2Q9HB29 575 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 CPNE5Q9HCH3 593 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 ZBTB26Q9HCK0 441 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 SAR1AQ9NR31 198 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 RASSF1Q9NS23 344 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF358Q9NW07 568 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 NTMQ9P121 344 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.32□□□□□ -1.88
PTPN22-211ENST00000538253 FOXD3Q9UJU5 478 aaPredicted RBP3.32□□□□□ -1.88
PTPN22-211ENST00000538253 GAB2Q9UQC2 676 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 B3GNT3Q9Y2A9 372 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 KLHL20Q9Y2M5 609 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 GMPPBQ9Y5P6 360 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 DNAJC15Q9Y5T4 150 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 COPG1Q9Y678 874 aaKnown RBP3.32□□□□□ -1.88
PTPN22-211ENST00000538253 KCNMB2Q9Y691 235 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 LRP4O75096 1905 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 GPR179Q6PRD1 2367 aa3.32□□□□□ -1.88
PTPN22-211ENST00000538253 RIF1Q5UIP0 2472 aaKnown RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 A8MUI8 341 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 B9A039 149 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SOCS6O14544 535 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 P2RX6O15547 441 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 DNPH1O43598 174 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 CIDEAO60543 219 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 STX11O75558 287 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 CNOT4O95628 575 aaKnown RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SNAP29O95721 258 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ACTL6AO96019 429 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 DBIP07108 87 aaKnown RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 PEPDP12955 493 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 PTBP1P26599 531 aaKnown RBP eCLIP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 AQP5P55064 265 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 GALEQ14376 348 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF766Q5HY98 468 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 C6orf10Q5SRN2 563 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 GCNT6Q5T4J0 391 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 OR2A2Q6IF42 318 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 COX15Q7KZN9 410 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SZRD1Q7Z422 152 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 COMTD1Q86VU5 262 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 C11orf65Q8NCR3 313 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 NAXEQ8NCW5 288 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 NUP43Q8NFH3 380 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 PSMA8Q8TAA3 256 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ELP5Q8TE02 316 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 NTNG2Q96CW9 530 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SLC35A4Q96G79 324 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 TMEM41AQ96HV5 264 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 TSSK3Q96PN8 268 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 BTBD9Q96Q07 612 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 EPYCQ99645 322 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 LMF2Q9BU23 707 aaKnown RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SDR39U1Q9NRG7 319 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 UBQLN4Q9NRR5 601 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 NKIRAS2Q9NYR9 191 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 KCMF1Q9P0J7 381 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 CTSFQ9UBX1 484 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SLC9A8Q9Y2E8 581 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 LRCH1Q9Y2L9 728 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 PCNX2A6NKB5 2137 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ASCC3Q8N3C0 2202 aaKnown RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 PCM1Q15154 2024 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 RNF103-CHMP3A0A140T963 221 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 A0A1W2PP18 115 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 KRT87PA6NCN2 255 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 PRAMEF25A6NGN4 478 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF860A6NHJ4 632 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 C1QTNF9BB2RNN3 333 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 H3BMH7 237 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 TFECO14948 347 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 BET1O15155 118 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 LDLRAD4O15165 306 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SCO2O43819 266 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 KLF7O75840 302 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SNAPINO95295 136 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 CRHP06850 196 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 QDPRP09417 244 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 FBXO45P0C2W1 286 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 C1QTNF9P0C862 333 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 OCM2P0CE71 109 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 OCMP0CE72 109 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 COX5BP10606 129 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ESRRAP11474 423 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SDC1P18827 310 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 IFNGR2P38484 337 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF41P51814 821 aaPredicted RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 PPP1CAP62136 330 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 GUCY1A3Q02108 690 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 BNIP2Q12982 314 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 SCARB2Q14108 478 aa3.31□□□□□ -1.88
PTPN22-211ENST00000538253 TRIM25Q14258 630 aaKnown RBP3.31□□□□□ -1.88
PTPN22-211ENST00000538253 IQCCQ4KMZ1 466 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms