RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 AK6Q9Y3D8 172 aaKnown RBP12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 WDFY4Q6ZS81 3184 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 FGBP02675 491 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 ANKRD34CP0C6C1 535 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 SLC35G4P0C7Q5 338 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 SAGP10523 405 aaPredicted RBP12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 MAKP20794 623 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 GABRA5P31644 462 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 PYCR1P32322 319 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 ARPC4P59998 168 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 PCDH1Q08174 1060 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 TGM3Q08188 693 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 RPA4Q13156 261 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 TRMT12Q53H54 448 aaKnown RBP12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 C1orf94Q6P1W5 598 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 CHMP1BQ7LBR1 199 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 GDF7Q7Z4P5 450 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 ZNF761Q86XN6 746 aaPredicted RBP12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 OR2L2Q8NH16 312 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 OR5J2Q8NH18 312 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 ZFAND1Q8TCF1 268 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 SLC35A4Q96G79 324 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 PEX11GQ96HA9 241 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 WDFY2Q96P53 400 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 SLC38A2Q96QD8 506 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 ALG8Q9BVK2 526 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 GSDMCQ9BYG8 508 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 SEMA4CQ9C0C4 833 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 CBLCQ9ULV8 474 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 PPIEQ9UNP9 301 aaKnown RBP12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 SEC16AO15027 2179 aa12.97□□□□□ -0.33
LPCAT3-203ENST00000535479 LRIT2A6NDA9 550 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 SLC9B1P1A6NJY1 282 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 I3L521 148 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 EML2O95834 649 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 ZGLP1P0C6A0 271 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 ENDOUP21128 410 aaKnown RBP12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 AK4P27144 223 aaPredicted RBP12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 P2RY2P41231 377 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 UBE2MP61081 183 aaKnown RBP12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 ZNF234Q14588 700 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 KCNAB1Q14722 419 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 NDUFAF6Q330K2 333 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 DEFB134Q4QY38 66 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 KLHL22Q53GT1 634 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 CXXC5Q7LFL8 322 aaKnown RBP12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 NATD1Q8N6N6 113 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 UXS1Q8NBZ7 420 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 PRRC1Q96M27 445 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 PTCHD1Q96NR3 888 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 LIPT1Q9Y234 373 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 SURF4O15260 269 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 SLC31A1O15431 190 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 NOS1APO75052 506 aaPredicted RBP12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 ADH5P11766 374 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 NTSP30990 170 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 OMPP47874 163 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 COX10Q12887 443 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 DSG2Q14126 1118 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 EXOSC7Q15024 291 aaKnown RBP12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 CDC73Q6P1J9 531 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 DCUN1D3Q8IWE4 304 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 ZNF687Q8N1G0 1237 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 ZNF655Q8N720 491 aaPredicted RBP12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 CLDN22Q8N7P3 220 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 OR7G2Q8NG99 324 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 CCL4L1Q8NHW4 92 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 CXorf40AQ8TE69 158 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 ZMYND19Q96E35 227 aaPredicted RBP12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 MSANTD3Q96H12 275 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 C4orf36Q96KX1 117 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 MCOLN1Q9GZU1 580 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 MED28Q9H204 178 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 NEUROD4Q9HD90 331 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 NANSQ9NR45 359 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 ING3Q9NXR8 418 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 APOBEC3BQ9UH17 382 aaKnown RBP12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 ENOPH1Q9UHY7 261 aa12.96□□□□□ -0.33
LPCAT3-203ENST00000535479 DAPL1A0PJW8 107 aa12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 MID1O15344 667 aa12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 CFDP00746 253 aaPredicted RBP12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 MLLT3P42568 568 aaPredicted RBP12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 RPS27P42677 84 aaKnown RBP12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 NTRK2Q16620 822 aa12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 METAP1DQ6UB28 335 aaPredicted RBP12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 ZAR1Q86SH2 424 aa12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 KLHL36Q8N4N3 616 aa12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 FBXO15Q8NCQ5 510 aaPredicted RBP12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 ZNF431Q8TF32 576 aaPredicted RBP12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 ZNF296Q8WUU4 475 aaPredicted RBP12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 POP5Q969H6 163 aaKnown RBP12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 SLC41A3Q96GZ6 507 aa12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 PDCD1LG2Q9BQ51 273 aa12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 IFT27Q9BW83 186 aa12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 NCKAP1Q9Y2A7 1128 aa12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 A0A1W2PP55 124 aa12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 MAN2B1O00754 1011 aa12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 CDC123O75794 336 aaPredicted RBP12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 CPMP14384 443 aa12.95□□□□□ -0.34
LPCAT3-203ENST00000535479 PAICSP22234 425 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms