RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 FCMRO60667 390 aa20.65■□□□□ 0.9
SFSWAP-204ENST00000535399 ANP32DO95626 131 aa20.65■□□□□ 0.9
SFSWAP-204ENST00000535399 HPGDP15428 266 aa20.65■□□□□ 0.9
SFSWAP-204ENST00000535399 ATP12AP54707 1039 aa20.65■□□□□ 0.9
SFSWAP-204ENST00000535399 NHSL2Q5HYW2 709 aa20.65■□□□□ 0.9
SFSWAP-204ENST00000535399 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.65■□□□□ 0.9
SFSWAP-204ENST00000535399 C3P1Q6ZMU1 363 aa20.65■□□□□ 0.9
SFSWAP-204ENST00000535399 C16orf62Q7Z3J2 963 aa20.65■□□□□ 0.9
SFSWAP-204ENST00000535399 AURKBQ96GD4 344 aaPredicted RBP20.65■□□□□ 0.9
SFSWAP-204ENST00000535399 TPT1P8Q9HAU6 139 aa20.65■□□□□ 0.9
SFSWAP-204ENST00000535399 TAS2R10Q9NYW0 307 aa20.65■□□□□ 0.9
SFSWAP-204ENST00000535399 ACAD8Q9UKU7 415 aa20.65■□□□□ 0.9
SFSWAP-204ENST00000535399 PCDHB14Q9Y5E9 798 aa20.65■□□□□ 0.9
SFSWAP-204ENST00000535399 GTF3C1Q12789 2109 aa20.65■□□□□ 0.9
SFSWAP-204ENST00000535399 C15orf38-AP3S2A0A0A6YYH1 394 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 STX11O75558 287 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 GUSBP08236 651 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 DPP4P27487 766 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 MAGEA8P43361 318 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 DSCR4P56555 118 aaPredicted RBP20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 PER3P56645 1201 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 CRYZQ08257 329 aaKnown RBP20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 CD226Q15762 336 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 PAGE3Q5JUK9 113 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 LRIF1Q5T3J3 769 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 AP1ARQ63HQ0 302 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 MISPQ8IVT2 679 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 OR14L1PQ8NHC6 308 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 ROPN1LQ96C74 230 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 DTNBP1Q96EV8 351 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 CCDC120Q96HB5 630 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 DMRTA2Q96SC8 542 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 NMUR2Q9GZQ4 415 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 KLHL14Q9P2G3 628 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 DKKL1Q9UK85 242 aa20.64■□□□□ 0.89
SFSWAP-204ENST00000535399 COL12A1Q99715 3063 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 A0A1W2PP18 115 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 E9PLN8 166 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 BMP7P18075 431 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 ANXA11P50995 505 aaKnown RBP20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 WLSQ5T9L3 541 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 VASNQ6EMK4 673 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 MSRB3Q8IXL7 192 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 ZNF527Q8NB42 609 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 C10orf82Q8WW14 230 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 C1GALT1C1Q96EU7 318 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 TIMP4Q99727 224 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 VKORC1Q9BQB6 163 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 UGT2B28Q9BY64 529 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 TP63Q9H3D4 680 aaPredicted RBP20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 HHATLQ9HCP6 504 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 POLE3Q9NRF9 147 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 SLC25A37Q9NYZ2 338 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 SLAMF8Q9P0V8 285 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 SUCOQ9UBS9 1254 aaKnown RBP20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 KCNE5Q9UJ90 142 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 MKLN1Q9UL63 735 aa20.63■□□□□ 0.89
SFSWAP-204ENST00000535399 DIDO1Q9BTC0 2240 aaKnown RBP20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 CENPVL1A0A0U1RR11 272 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 KIAA0513O60268 411 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 ZG16O60844 167 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 ESRRAP11474 423 aaPredicted RBP20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 GFRA1P56159 465 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 B3GALT5-AS1P59052 145 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 ADORA2A-AS1P86434 159 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 GANABQ14697 944 aaKnown RBP20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 GPR68Q15743 365 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 ZNF141Q15928 474 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 DCST1Q5T197 706 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 TYW3Q6IPR3 259 aaKnown RBP20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 ZNF585AQ6P3V2 769 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 MTFR2Q6P444 385 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 NCCRP1Q6ZVX7 275 aaPredicted RBP20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 ANKFN1Q8N957 763 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 ABTB1Q969K4 478 aaPredicted RBP20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 KLHDC3Q9BQ90 382 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 SAP130Q9H0E3 1048 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 DTNAQ9Y4J8 743 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 USP9YO00507 2555 aaPredicted RBP20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 SPTAN1Q13813 2472 aaKnown RBP20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 MYO7BQ6PIF6 2116 aa20.62■□□□□ 0.89
SFSWAP-204ENST00000535399 DOPEY2Q9Y3R5 2298 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 TRBV5-3A0A0A0MS03 114 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 ACTL6AO96019 429 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 ETFAP13804 333 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 MSX1P28360 303 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 RNF144AP50876 292 aaPredicted RBP20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 GYS2P54840 703 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 SYPL1Q16563 259 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 PDZK1Q5T2W1 519 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 FRRS1Q6ZNA5 592 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 MTERF4Q7Z6M4 381 aaKnown RBP20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 IFNEQ86WN2 208 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 RPRMLQ8N4K4 120 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 MARVELD2Q8N4S9 558 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 PHOSPHO1Q8TCT1 267 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 TSPEARQ8WU66 669 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 PHF10Q8WUB8 498 aaKnown RBP20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 PSMG3-AS1Q96PY0 264 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 TRNT1Q96Q11 434 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms