RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ZNF45Q02386 682 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 GABPB1Q06547 395 aaPredicted RBP3.34□□□□□ -1.87
PRKDC-205ENST00000535375 PDZK1IP1Q13113 114 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 IL17AQ16552 155 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 ACSF3Q4G176 576 aaPredicted RBP3.34□□□□□ -1.87
PRKDC-205ENST00000535375 OR2B11Q5JQS5 317 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 IL23RQ5VWK5 629 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 KHDRBS2Q5VWX1 349 aaKnown RBP3.34□□□□□ -1.87
PRKDC-205ENST00000535375 OR5M10Q6IEU7 315 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 IGFL3Q6UXB1 125 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 TMEM26Q6ZUK4 368 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 FRA10AC1Q70Z53 315 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 HSD17B13Q7Z5P4 300 aaPredicted RBP3.34□□□□□ -1.87
PRKDC-205ENST00000535375 ENTHD1Q8IYW4 607 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 BCORP1Q8N888 145 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 MCHR2Q969V1 340 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 C18orf25Q96B23 403 aaPredicted RBP3.34□□□□□ -1.87
PRKDC-205ENST00000535375 TMEM231Q9H6L2 316 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 NANOGQ9H9S0 305 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 RBM28Q9NW13 759 aaKnown RBP3.34□□□□□ -1.87
PRKDC-205ENST00000535375 BCAP29Q9UHQ4 241 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 U3KQV3 271 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 LATO43561 262 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 LANCL1O43813 399 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 RAMP1O60894 148 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 AKR7A3O95154 331 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 GUCA1CO95843 209 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 HEXBP07686 556 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 RALAP11233 206 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 CDH5P33151 784 aaPredicted RBP3.33□□□□□ -1.88
PRKDC-205ENST00000535375 HSPA1LP34931 641 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 MDH1P40925 334 aaKnown RBP3.33□□□□□ -1.88
PRKDC-205ENST00000535375 EMDP50402 254 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 MYBPC1Q00872 1141 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 SCGB2A2Q13296 93 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 KCNJ11Q14654 390 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 HERPUD1Q15011 391 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 TAF7Q15545 349 aaPredicted RBP3.33□□□□□ -1.88
PRKDC-205ENST00000535375 DCST2Q5T1A1 773 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 SULT1C3Q6IMI6 304 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 HACD2Q6Y1H2 254 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 BBS1Q8NFJ9 593 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 OR52B4Q8NGK2 314 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 ART4Q93070 314 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 NCLNQ969V3 563 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 ROPN1Q9HAT0 212 aaPredicted RBP3.33□□□□□ -1.88
PRKDC-205ENST00000535375 PNO1Q9NRX1 252 aaKnown RBP3.33□□□□□ -1.88
PRKDC-205ENST00000535375 ANKMY1Q9P2S6 941 aa3.33□□□□□ -1.88
PRKDC-205ENST00000535375 RNF222A6NCQ9 220 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 NDC80O14777 642 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 CHADO15335 359 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 LYPLA1O75608 230 aaPredicted RBP3.32□□□□□ -1.88
PRKDC-205ENST00000535375 MMP23AO75900 390 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 NDUFA7O95182 113 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 ASNSP08243 561 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 CALRP27797 417 aaKnown RBP3.32□□□□□ -1.88
PRKDC-205ENST00000535375 PRDX2P32119 198 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 HSD17B7P56937 341 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 OC90Q02509 493 aaPredicted RBP3.32□□□□□ -1.88
PRKDC-205ENST00000535375 ELAVL3Q14576 367 aaKnown RBP3.32□□□□□ -1.88
PRKDC-205ENST00000535375 LRIT3Q3SXY7 679 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 CCDC14Q49A88 953 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 TEX44Q53QW1 395 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 CYBRD1Q53TN4 286 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 CERS5Q8N5B7 392 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 Q8N9L7 120 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 LINC01555Q8NAE3 123 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 CCDC110Q8TBZ0 833 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 IL4I1Q96RQ9 567 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 WRAP53Q9BUR4 548 aaKnown RBP3.32□□□□□ -1.88
PRKDC-205ENST00000535375 ATXN10Q9UBB4 475 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 ZNF221Q9UK13 617 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 EXOSC1Q9Y3B2 195 aaKnown RBP3.32□□□□□ -1.88
PRKDC-205ENST00000535375 ANKRD30BQ9BXX2 1392 aa3.32□□□□□ -1.88
PRKDC-205ENST00000535375 A0A1B0GWJ7 208 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 E9PMD0 336 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 SGK494L7N484 410 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 CLDN3O15551 220 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 PPIHO43447 177 aaKnown RBP3.31□□□□□ -1.88
PRKDC-205ENST00000535375 CA11O75493 328 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 DIRAS3O95661 229 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 IFNB1P01574 187 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 HPNP05981 417 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 PTPN6P29350 595 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 RPL4P36578 427 aaKnown RBP3.31□□□□□ -1.88
PRKDC-205ENST00000535375 DHPSP49366 369 aaPredicted RBP3.31□□□□□ -1.88
PRKDC-205ENST00000535375 TIMM10P62072 90 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 KLHL30Q0D2K2 578 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 UBE2V2Q15819 145 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 GALNT17Q6IS24 598 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 LEG1Q6P5S2 330 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 ARSKQ6UWY0 536 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 PAQR9Q6ZVX9 377 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 NET1Q7Z628 596 aaPredicted RBP3.31□□□□□ -1.88
PRKDC-205ENST00000535375 ZNF100Q8IYN0 542 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 ARL6IP6Q8N6S5 226 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 NEIL2Q969S2 332 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 SYAP1Q96A49 352 aaPredicted RBP3.31□□□□□ -1.88
PRKDC-205ENST00000535375 SMIM14Q96QK8 99 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 SLC35D1Q9NTN3 355 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms