RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 PTGDR2Q9Y5Y4 395 aa7.26□□□□□ -1.25
CLIP1-206ENST00000535290 M0R1B8 84 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 NDUFB5O43674 189 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 ERAL1O75616 437 aaKnown RBP7.25□□□□□ -1.25
CLIP1-206ENST00000535290 YES1P07947 543 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 PABPC4LP0CB38 370 aaKnown RBP7.25□□□□□ -1.25
CLIP1-206ENST00000535290 CSNK2A2P19784 350 aaPredicted RBP7.25□□□□□ -1.25
CLIP1-206ENST00000535290 PSMA4P25789 261 aaKnown RBP7.25□□□□□ -1.25
CLIP1-206ENST00000535290 GIFP27352 417 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 MAPK1P28482 360 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 SHC1P29353 583 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 OR3A2P47893 321 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 CARD18P57730 90 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 UBA52P62987 128 aaKnown RBP7.25□□□□□ -1.25
CLIP1-206ENST00000535290 RAC1P63000 192 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 SCGB2A2Q13296 93 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 MORF4L2Q15014 288 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 OR4D1Q15615 310 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 ZNF239Q16600 458 aaKnown RBP7.25□□□□□ -1.25
CLIP1-206ENST00000535290 GRHL2Q6ISB3 625 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 SHQ1Q6PI26 577 aaKnown RBP7.25□□□□□ -1.25
CLIP1-206ENST00000535290 ESPNLQ6ZVH7 1005 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 SSX8Q7RTT4 187 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 GLCCI1Q86VQ1 547 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 NUDT13Q86X67 352 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 IGDCC3Q8IVU1 814 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 SLC44A2Q8IWA5 706 aaPredicted RBP7.25□□□□□ -1.25
CLIP1-206ENST00000535290 GTPBP8Q8N3Z3 284 aaPredicted RBP7.25□□□□□ -1.25
CLIP1-206ENST00000535290 FAM110BQ8TC76 370 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 CERS2Q96G23 380 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 SRXN1Q9BYN0 137 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 CD244Q9BZW8 370 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 CDC42EP4Q9H3Q1 356 aaKnown RBP7.25□□□□□ -1.25
CLIP1-206ENST00000535290 LPAR2Q9HBW0 351 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 PPANQ9NQ55 473 aaKnown RBP7.25□□□□□ -1.25
CLIP1-206ENST00000535290 SDHAF3Q9NRP4 125 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 HIF1ANQ9NWT6 349 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 STOML1Q9UBI4 398 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 ING1Q9UK53 422 aaPredicted RBP7.25□□□□□ -1.25
CLIP1-206ENST00000535290 CORO1CQ9ULV4 474 aaPredicted RBP7.25□□□□□ -1.25
CLIP1-206ENST00000535290 PSAT1Q9Y617 370 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 SLC25A15Q9Y619 301 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 CAPN6Q9Y6Q1 641 aa7.25□□□□□ -1.25
CLIP1-206ENST00000535290 IGLV3-32A0A0A0MS00 114 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 GOLGA6L10A0A0M3HER8 536 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 GOLGA6L10A6NI86 522 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 B4DSR2 109 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 C9JVG2 144 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 RAD51DO75771 328 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 PRKD3O94806 890 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 AVPP01185 164 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 KLK1P06870 262 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 ZNF17P17021 662 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 PGCP20142 388 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 COX5AP20674 150 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 ENPP1P22413 925 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 PHC1P78364 1004 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 MRPS22P82650 360 aaKnown RBP7.24□□□□□ -1.25
CLIP1-206ENST00000535290 CUL3Q13618 768 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 MLC1Q15049 377 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 RNPS1Q15287 305 aaKnown RBP7.24□□□□□ -1.25
CLIP1-206ENST00000535290 CDKL4Q5MAI5 379 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 SLC48A1Q6P1K1 146 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 TRMT10BQ6PF06 316 aaKnown RBP7.24□□□□□ -1.25
CLIP1-206ENST00000535290 KLHL17Q6TDP4 642 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 APOOLQ6UXV4 268 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 RAD9BQ6WBX8 426 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 LRRC70Q7Z2Q7 622 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 SLC46A3Q7Z3Q1 461 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 MYLK4Q86YV6 388 aaPredicted RBP7.24□□□□□ -1.25
CLIP1-206ENST00000535290 TXLNBQ8N3L3 684 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 ZNF433Q8N7K0 673 aaPredicted RBP7.24□□□□□ -1.25
CLIP1-206ENST00000535290 TMEM186Q96B77 213 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 ZBTB8AQ96BR9 441 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 ZNF775Q96BV0 537 aaPredicted RBP7.24□□□□□ -1.25
CLIP1-206ENST00000535290 CNRIP1Q96F85 164 aaPredicted RBP7.24□□□□□ -1.25
CLIP1-206ENST00000535290 REXO5Q96IC2 774 aaKnown RBP7.24□□□□□ -1.25
CLIP1-206ENST00000535290 RNF145Q96MT1 663 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 ZNF681Q96N22 645 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 SLC6A7Q99884 636 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 KLHDC3Q9BQ90 382 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 C1QTNF5Q9BXJ0 243 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 DERL2Q9GZP9 239 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 CXorf36Q9H7Y0 433 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 CD274Q9NZQ7 290 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 DCTN4Q9UJW0 460 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 ABCG2Q9UNQ0 655 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 TSC22D4Q9Y3Q8 395 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 OR10H1Q9Y4A9 318 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 PCDHA9Q9Y5H5 950 aa7.24□□□□□ -1.25
CLIP1-206ENST00000535290 LOC105371242A0A075B767 164 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 FAM95CA0A1B0GW59 222 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 ATP6V1G2-DDX39BF2Z307 99 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 SNUPNO95149 360 aaKnown RBP7.23□□□□□ -1.25
CLIP1-206ENST00000535290 WISP3O95389 354 aaPredicted RBP7.23□□□□□ -1.25
CLIP1-206ENST00000535290 IL33O95760 270 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 TTC4O95801 387 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 KRT14P02533 472 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 DAOP14920 347 aa7.23□□□□□ -1.25
CLIP1-206ENST00000535290 SFTPDP35247 375 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms