RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ARHGAP1Q07960 439 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 WASHC5Q12768 1159 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 NPRL3Q12980 569 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 STK11Q15831 433 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 CDKN3Q16667 212 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 TWISTNBQ3B726 338 aaPredicted RBP0.13□□□□□ -2.39
COPB1-212ENST00000534771 TEX44Q53QW1 395 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 WDR74Q6RFH5 385 aaPredicted RBP0.13□□□□□ -2.39
COPB1-212ENST00000534771 C19orf35Q6ZS72 473 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 NAA40Q86UY6 237 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 SMC5Q8IY18 1101 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 PGAM4Q8N0Y7 254 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 OSR2Q8N2R0 312 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 PNKDQ8N490 385 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 FTMTQ8N4E7 242 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 OR4F17Q8NGA8 305 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 SYNPRQ8TBG9 265 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 SELENOMQ8WWX9 145 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 GGHQ92820 318 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 RPUSD4Q96CM3 377 aaKnown RBP0.13□□□□□ -2.39
COPB1-212ENST00000534771 TMEM80Q96HE8 168 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 OR4F4Q96R69 305 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 STACQ99469 402 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 FERMT1Q9BQL6 677 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 FUNDC2Q9BWH2 189 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 FAM129AQ9BZQ8 928 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 MAGT1Q9H0U3 335 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 GANQ9H2C0 597 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 SLC25A22Q9H936 323 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 CAB39LQ9H9S4 337 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 DMAP1Q9NPF5 467 aaPredicted RBP0.13□□□□□ -2.39
COPB1-212ENST00000534771 DDX28Q9NUL7 540 aaKnown RBP0.13□□□□□ -2.39
COPB1-212ENST00000534771 EXD2Q9NVH0 621 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 AIG1Q9NVV5 245 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 SLCO1C1Q9NYB5 712 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 VPS54Q9P1Q0 977 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 GNPTGQ9UJJ9 305 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 DIMT1Q9UNQ2 313 aaKnown RBP0.13□□□□□ -2.39
COPB1-212ENST00000534771 SAMD4AQ9UPU9 718 aaKnown RBP0.13□□□□□ -2.39
COPB1-212ENST00000534771 KCNK6Q9Y257 313 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 LRP4O75096 1905 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 YEATS2Q9ULM3 1422 aa0.13□□□□□ -2.39
COPB1-212ENST00000534771 HELZ2Q9BYK8 2649 aaKnown RBP0.12□□□□□ -2.39
COPB1-212ENST00000534771 IGLV11-55A0A075B6I3 123 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 A0A1B0GW55 424 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 HTR3EA5X5Y0 456 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 VGLL3A8MV65 326 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 RAMP1O60894 148 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 SS18L1O75177 396 aaPredicted RBP0.12□□□□□ -2.39
COPB1-212ENST00000534771 TNFSF13O75888 250 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 AKAP3O75969 853 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 STARD3NLO95772 234 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 GAS8O95995 478 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 MOSP00540 346 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 PRB1P04280 392 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 RLN1P04808 185 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 IGFBP1P08833 259 aaPredicted RBP0.12□□□□□ -2.39
COPB1-212ENST00000534771 FAM58BPP0C7Q3 252 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 DUX4L2P0CJ85 424 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 DUX4L3P0CJ86 424 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 DUX4L5P0CJ88 424 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 DUX4L6P0CJ89 424 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 DUX4L7P0CJ90 424 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 CPA3P15088 417 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 TGFBR1P36897 503 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 RPS6P62753 249 aaKnown RBP0.12□□□□□ -2.39
COPB1-212ENST00000534771 IL9RQ01113 521 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 ENPEPQ07075 957 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 ZNF154Q13106 437 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 PPP2R5CQ13362 524 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 CAMK2DQ13557 499 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 GNMTQ14749 295 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 STX1AQ16623 288 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 TCP11X2Q5H9J9 407 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 TMEM255AQ5JRV8 349 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 LRRC38Q5VT99 294 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 LIPKQ5VXJ0 399 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 FBXW9Q5XUX1 488 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 CDC42EP5Q6NZY7 148 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 DUX4L9Q6RFH8 374 aaPredicted RBP0.12□□□□□ -2.39
COPB1-212ENST00000534771 C6orf89Q6UWU4 347 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 UNQ9370/PRO34162Q6UXP9 181 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 ZNF621Q6ZSS3 439 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 ASPGQ86U10 573 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 RANBP3LQ86VV4 465 aaPredicted RBP0.12□□□□□ -2.39
COPB1-212ENST00000534771 VRK2Q86Y07 508 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 SKA3Q8IX90 412 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 SYT14Q8NB59 555 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 SIDT2Q8NBJ9 832 aaKnown RBP0.12□□□□□ -2.39
COPB1-212ENST00000534771 OR8H1Q8NGG4 311 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 DNASE1L2Q92874 299 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 SKA1Q96BD8 255 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 LZTS2Q9BRK4 669 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 ST6GALNAC4Q9H4F1 302 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 CALHM2Q9HA72 323 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 RBM28Q9NW13 759 aaKnown RBP0.12□□□□□ -2.39
COPB1-212ENST00000534771 ANKMY1Q9P2S6 941 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 ERVK-18Q9QC07 812 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 DUX4Q9UBX2 424 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 ZNF629Q9UEG4 869 aaPredicted RBP0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms