RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 LILRA2Q8N149 483 aa10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 FAM86B1Q8N7N1 296 aa10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 TMEM102Q8N9M5 508 aaPredicted RBP10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 ZNF721Q8TF20 911 aa10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 TP53INP1Q96A56 240 aa10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 NRBF2Q96F24 287 aa10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 OTUB1Q96FW1 271 aaPredicted RBP10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 GAL3ST4Q96RP7 486 aa10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 TACO1Q9BSH4 297 aaKnown RBP10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 ITPAQ9BY32 194 aa10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 SAP130Q9H0E3 1048 aa10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 SEMA6AQ9H2E6 1030 aa10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 HHATLQ9HCP6 504 aa10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 PPIEQ9UNP9 301 aaKnown RBP10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 GPR55Q9Y2T6 319 aaPredicted RBP10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 RAXQ9Y2V3 346 aa10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 ORC6Q9Y5N6 252 aa10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 DMXL2Q8TDJ6 3036 aa10.1□□□□□ -0.79
CCDC90B-218ENST00000533761 ZNF891A8MT65 544 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 G3V2T6 193 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 H3BNH8 94 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 PEX12O00623 359 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 GCM2O75603 506 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 PRSS23O95084 383 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 SEMG1P04279 462 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 CT45A8P0DMV1 189 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 CT45A9P0DMV2 189 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 IL12BP29460 328 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 DNAJA1P31689 397 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 OTX2P32243 289 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 SOX18P35713 384 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 TMED10P49755 219 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 UCNP55089 124 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 FOXL2P58012 376 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 TLE3Q04726 772 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 CHRNEQ04844 493 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 EPS8Q12929 822 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 EBPQ15125 230 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 GPR68Q15743 365 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 LRRC36Q1X8D7 754 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 CT45A2Q5DJT8 189 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 FAAH2Q6GMR7 532 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 CCDC81Q6ZN84 652 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 FRRS1Q6ZNA5 592 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 LANCL3Q6ZV70 420 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 WDR53Q7Z5U6 358 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 AMIGO2Q86SJ2 522 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 RANBP3LQ86VV4 465 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 PIK3C3Q8NEB9 887 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 NUBPLQ8TB37 319 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 THAP4Q8WY91 577 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 PIK3R3Q92569 461 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 SLC35B4Q969S0 331 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 PIP5K1AQ99755 562 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 ARHGAP9Q9BRR9 750 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 SEMA4CQ9C0C4 833 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 POLR2J2Q9GZM3 115 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 WWTR1Q9GZV5 400 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 POLR2J3Q9H1A7 115 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 MKLN1Q9UL63 735 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 MRPS18BQ9Y676 258 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 ENPP4Q9Y6X5 453 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 IGF2RP11717 2491 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 A0A087WV48 116 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 LOC102723996A0A087X1L8 192 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 PRAMEF27A3QJZ7 478 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 hCG_2039718K7EN88 272 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 HRKO00198 91 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 AP3D1O14617 1153 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 TO15178 435 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 UGT2B17O75795 530 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 DNAJB5O75953 348 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 ZFAND5O76080 213 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 LGI1O95970 557 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 MT-ND1P03886 318 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 NID1P14543 1247 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 UQCRBP14927 111 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 CDH2P19022 906 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 CD247P20963 164 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 RFX3P48380 749 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 CRYBA2P53672 197 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 MAPK11Q15759 364 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 DUSP7Q16829 419 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 RNF220Q5VTB9 566 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 FIGNL1Q6PIW4 674 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 IZUMO2Q6UXV1 221 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 SIMC1Q8NDZ2 872 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 OR5K1Q8NHB7 308 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 PHF10Q8WUB8 498 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 DNAJC9Q8WXX5 260 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 RDH12Q96NR8 316 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 ZNF300Q96RE9 604 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 EPYCQ99645 322 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 CIB1Q99828 191 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 RBM4BQ9BQ04 359 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 RBM4Q9BWF3 364 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 UBQLN4Q9NRR5 601 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 OAZ3Q9UMX2 235 aa10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 ZNF443Q9Y2A4 671 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-218ENST00000533761 SAMHD1Q9Y3Z3 626 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms