RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SIRPAP78324 504 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 POU6F2P78424 691 aaPredicted RBP9.43□□□□□ -0.9
CAPN1-225ENST00000533704 LSM12Q3MHD2 195 aaKnown RBP9.43□□□□□ -0.9
CAPN1-225ENST00000533704 FBXL19-AS1Q494R0 122 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 ZNF781Q8N8C0 355 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 ANKRD42Q8N9B4 389 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 OR6Y1Q8NGX8 325 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 OR4C3Q8NH37 302 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 OR5AK3PQ8NH89 298 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 LINC01560Q8TB33 94 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 FAM222BQ8WU58 562 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 OR5P2Q8WZ92 322 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 ZFP3Q96NJ6 502 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 ZIM3Q96PE6 472 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 PIGQQ9BRB3 760 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 SFXN3Q9BWM7 321 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 BTBD2Q9BX70 525 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 PINK1Q9BXM7 581 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 ACBD3Q9H3P7 528 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 CXorf36Q9H7Y0 433 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 SIRT3Q9NTG7 399 aaPredicted RBP9.43□□□□□ -0.9
CAPN1-225ENST00000533704 GIN1Q9NXP7 522 aa9.43□□□□□ -0.9
CAPN1-225ENST00000533704 FAF1Q9UNN5 650 aaPredicted RBP9.43□□□□□ -0.9
CAPN1-225ENST00000533704 UQCRHLA0A096LP55 91 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 TM9SF1O15321 606 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 BIRC5O15392 142 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 CTAG2O75638 210 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 OPN1LWP04000 364 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 ATP6V1C1P21283 382 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 PEX19P40855 299 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 MAP3K8P41279 467 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 SLC1A6P48664 564 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 ZNF41P51814 821 aaPredicted RBP9.42□□□□□ -0.9
CAPN1-225ENST00000533704 SUCLG1P53597 346 aaKnown RBP9.42□□□□□ -0.9
CAPN1-225ENST00000533704 DIO3P55073 304 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 CLDN20P56880 219 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 EEFSECP57772 596 aaKnown RBP9.42□□□□□ -0.9
CAPN1-225ENST00000533704 RPS3AP61247 264 aaKnown RBP9.42□□□□□ -0.9
CAPN1-225ENST00000533704 MAD2L1Q13257 205 aaPredicted RBP9.42□□□□□ -0.9
CAPN1-225ENST00000533704 MLC1Q15049 377 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 BCL2A1Q16548 175 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 SGCBQ16585 318 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.42□□□□□ -0.9
CAPN1-225ENST00000533704 HHATQ5VTY9 493 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 ZCCHC12Q6PEW1 402 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 ADGRE4PQ86SQ3 457 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 ZNF614Q8N883 585 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 OR56A1Q8NGH5 318 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 GOT1L1Q8NHS2 421 aaPredicted RBP9.42□□□□□ -0.9
CAPN1-225ENST00000533704 ADAMTS15Q8TE58 950 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 FIG4Q92562 907 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 HOXB13Q92826 284 aaPredicted RBP9.42□□□□□ -0.9
CAPN1-225ENST00000533704 ZNF845Q96IR2 970 aaPredicted RBP9.42□□□□□ -0.9
CAPN1-225ENST00000533704 DUSP26Q9BV47 211 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 ACTRT3Q9BYD9 372 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 CLEC4MQ9H2X3 399 aaPredicted RBP9.42□□□□□ -0.9
CAPN1-225ENST00000533704 SSU72Q9NP77 194 aaKnown RBP9.42□□□□□ -0.9
CAPN1-225ENST00000533704 UBQLN4Q9NRR5 601 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 GALNT8Q9NY28 637 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 NOP53Q9NZM5 478 aaKnown RBP9.42□□□□□ -0.9
CAPN1-225ENST00000533704 NTMQ9P121 344 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 PACSIN3Q9UKS6 424 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 RAB21Q9UL25 225 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 RAP2CQ9Y3L5 183 aa9.42□□□□□ -0.9
CAPN1-225ENST00000533704 CSMD2Q7Z408 3487 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 HRNRQ86YZ3 2850 aaPredicted RBP9.41□□□□□ -0.9
CAPN1-225ENST00000533704 IGLV3-32A0A0A0MS00 114 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 A0A1W2PNV4 684 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 A6NNC1 897 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 ALG1L2C9J202 215 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 EIF1AYO14602 144 aaKnown RBP9.41□□□□□ -0.9
CAPN1-225ENST00000533704 HCRTR2O43614 444 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 NUDT14O95848 222 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 KRT16P08779 473 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 TBXA2RP21731 343 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 EIF1AXP47813 144 aaKnown RBP9.41□□□□□ -0.9
CAPN1-225ENST00000533704 RPL14P50914 215 aaKnown RBP9.41□□□□□ -0.9
CAPN1-225ENST00000533704 ART1P52961 327 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 CLDN15P56746 228 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 RPS26P62854 115 aaKnown RBP9.41□□□□□ -0.9
CAPN1-225ENST00000533704 EMX2Q04743 252 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 STX3Q13277 289 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 MPP2Q14168 576 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 PON3Q15166 354 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 POU4F3Q15319 338 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 OR4F3Q6IEY1 312 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 OR2A2Q6IF42 318 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 CDC73Q6P1J9 531 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 VWA1Q6PCB0 445 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 CLECL1Q8IZS7 167 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 CLEC4FQ8N1N0 589 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 FNDC9Q8TBE3 224 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 FAM110BQ8TC76 370 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 PHOSPHO1Q8TCT1 267 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 MGARPQ8TDB4 240 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 COQ8BQ96D53 544 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 UCN2Q96RP3 112 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 STACQ99469 402 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 NUF2Q9BZD4 464 aa9.41□□□□□ -0.9
CAPN1-225ENST00000533704 PRRG4Q9BZD6 226 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms