RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 BTBD2Q9BX70 525 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 RIBC2Q9H4K1 309 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 PTTG2Q9NZH5 202 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 COPS7AQ9UBW8 275 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 MYRFQ9Y2G1 1151 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 PCDH17O14917 1159 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 RAD23AP54725 363 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 PSG6Q00889 435 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 SSPNQ14714 243 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 TCTN3Q6NUS6 607 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 VRK2Q86Y07 508 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 APCDD1LQ8NCL9 501 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 ZNF555Q8NEP9 628 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 NXPE2Q96DL1 559 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 KRT84Q9NSB2 600 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 MKLN1Q9UL63 735 aa17.09■□□□□ 0.33
SMPD1-208ENST00000533123 DUXAA6NLW8 204 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 SOCS6O14544 535 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 CLPTM1O96005 669 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 LIPCP11150 499 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 GABRA3P34903 492 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 LIMS1P48059 325 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 EPS8Q12929 822 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 IL10RAQ13651 578 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 PCOLCEQ15113 449 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 NNATQ16517 81 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 PRAMEF8Q5VWM4 474 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 PRAMEF7Q5VXH5 474 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 ZCCHC12Q6PEW1 402 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 FRRS1Q6ZNA5 592 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 PPP1R32Q7Z5V6 425 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 SLC5A8Q8N695 610 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 PIK3C3Q8NEB9 887 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 OR11G2Q8NGC1 345 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 OR10G2Q8NGC3 310 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 GPR151Q8TDV0 419 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 GIPC3Q8TF64 312 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 PIK3R3Q92569 461 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 FEVQ99581 238 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 ITPAQ9BY32 194 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 KCND3Q9UK17 655 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 WASF3Q9UPY6 502 aa17.08■□□□□ 0.33
SMPD1-208ENST00000533123 IGHV1-45A0A0A0MS14 117 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 GADD45GO95257 159 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 IGHEP01854 428 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 ALOX5P09917 674 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 COX6A1P12074 109 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 EPHA2P29317 976 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 MAP3K8P41279 467 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 RANBP1P43487 201 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 HPCAP84074 193 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 RFX4Q33E94 735 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 EXOSC6Q5RKV6 272 aaKnown RBP17.08■□□□□ 0.32
SMPD1-208ENST00000533123 TTC23Q5W5X9 447 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 C9orf40Q8IXQ3 194 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 OR9Q2Q8NGE9 314 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 SPATA5L1Q9BVQ7 753 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 PIGUQ9H490 435 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 GPN2Q9H9Y4 310 aaPredicted RBP17.08■□□□□ 0.32
SMPD1-208ENST00000533123 PRODH2Q9UF12 536 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 FRYQ5TBA9 3013 aa17.08■□□□□ 0.32
SMPD1-208ENST00000533123 LOC100130705A0A1B0GUX0 176 aa17.07■□□□□ 0.32
SMPD1-208ENST00000533123 ALPPP05187 535 aa17.07■□□□□ 0.32
SMPD1-208ENST00000533123 ELK4P28324 431 aa17.07■□□□□ 0.32
SMPD1-208ENST00000533123 CDH15P55291 814 aa17.07■□□□□ 0.32
SMPD1-208ENST00000533123 SLC26A5P58743 744 aa17.07■□□□□ 0.32
SMPD1-208ENST00000533123 MICAQ29983 383 aa17.07■□□□□ 0.32
SMPD1-208ENST00000533123 ZNF311Q5JNZ3 666 aa17.07■□□□□ 0.32
SMPD1-208ENST00000533123 PHF10Q8WUB8 498 aaKnown RBP17.07■□□□□ 0.32
SMPD1-208ENST00000533123 GAL3ST4Q96RP7 486 aa17.07■□□□□ 0.32
SMPD1-208ENST00000533123 LMF2Q9BU23 707 aaKnown RBP17.07■□□□□ 0.32
SMPD1-208ENST00000533123 RBM38Q9H0Z9 239 aaKnown RBP17.07■□□□□ 0.32
SMPD1-208ENST00000533123 ZNF223Q9UK11 482 aaPredicted RBP17.07■□□□□ 0.32
SMPD1-208ENST00000533123 CFAP47Q6ZTR5 3102 aa17.07■□□□□ 0.32
SMPD1-208ENST00000533123 CENPVL1A0A0U1RR11 272 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 CT45A8P0DMV1 189 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 CT45A9P0DMV2 189 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 PLA2G5P39877 138 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 APOFQ13790 326 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 ZNHIT3Q15649 155 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-208ENST00000533123 ARHGAP11BQ3KRB8 267 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 NADK2Q4G0N4 442 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 CT45A2Q5DJT8 189 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 TYW3Q6IPR3 259 aaKnown RBP17.06■□□□□ 0.32
SMPD1-208ENST00000533123 NPSR1Q6W5P4 371 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 B3GNT6Q6ZMB0 384 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 TSPYL5Q86VY4 417 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-208ENST00000533123 COX18Q8N8Q8 333 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 OR4N2Q8NGD1 307 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 OR6T1Q8NGN1 323 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 HOXB13Q92826 284 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-208ENST00000533123 ZNF700Q9H0M5 742 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 NMNAT1Q9HAN9 279 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-208ENST00000533123 DUSP22Q9NRW4 184 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 FBXO34Q9NWN3 711 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 CALML5Q9NZT1 146 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 PPIEQ9UNP9 301 aaKnown RBP17.06■□□□□ 0.32
SMPD1-208ENST00000533123 GPR55Q9Y2T6 319 aaPredicted RBP17.06■□□□□ 0.32
SMPD1-208ENST00000533123 CHST2Q9Y4C5 530 aa17.06■□□□□ 0.32
SMPD1-208ENST00000533123 PCDHGA6Q9Y5G7 932 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms