RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 ANKRD10Q9NXR5 420 aa13.13□□□□□ -0.31
COL16A1-217ENST00000532877 SEC14L3Q9UDX4 400 aa13.13□□□□□ -0.31
COL16A1-217ENST00000532877 TLN1Q9Y490 2541 aaKnown RBP13.13□□□□□ -0.31
COL16A1-217ENST00000532877 RELNP78509 3460 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 SERPINB7O75635 380 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 MFN2O95140 757 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 STAMBPO95630 424 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 OXSR1O95747 527 aaPredicted RBP13.12□□□□□ -0.31
COL16A1-217ENST00000532877 WDPCPO95876 746 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 SERPINA1P01009 418 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 DBIP07108 87 aaKnown RBP13.12□□□□□ -0.31
COL16A1-217ENST00000532877 NGFRP08138 427 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 PABPC4LP0CB38 370 aaKnown RBP13.12□□□□□ -0.31
COL16A1-217ENST00000532877 EVI2BP34910 448 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 HLCSP50747 726 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 KCNC4Q03721 635 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 DMTNQ08495 405 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 MFAP5Q13361 173 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 CYBRD1Q53TN4 286 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 PDZK1Q5T2W1 519 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 BORAQ6PGQ7 559 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 NUP54Q7Z3B4 507 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 VRK2Q86Y07 508 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 ARMC8Q8IUR7 673 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 GPALPP1Q8IXQ4 340 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 CYP4Z2PQ8N1L4 340 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 BHLHE22Q8NFJ8 381 aaPredicted RBP13.12□□□□□ -0.31
COL16A1-217ENST00000532877 OR52E4Q8NGH9 312 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 OR52P1PQ8NH57 321 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 WDR60Q8WVS4 1066 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 OIT3Q8WWZ8 545 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 LRGUKQ96M69 825 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 RNF145Q96MT1 663 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 NODALQ96S42 347 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 SPATA5L1Q9BVQ7 753 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 RSPO3Q9BXY4 272 aaPredicted RBP13.12□□□□□ -0.31
COL16A1-217ENST00000532877 TRIM15Q9C019 465 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 HOXD1Q9GZZ0 328 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 CACYBPQ9HB71 228 aaKnown RBP13.12□□□□□ -0.31
COL16A1-217ENST00000532877 UBQLN4Q9NRR5 601 aa13.12□□□□□ -0.31
COL16A1-217ENST00000532877 DCAF13Q9NV06 445 aaKnown RBP13.12□□□□□ -0.31
COL16A1-217ENST00000532877 ZNF443Q9Y2A4 671 aaPredicted RBP13.12□□□□□ -0.31
COL16A1-217ENST00000532877 CHCHD2Q9Y6H1 151 aaPredicted RBP13.12□□□□□ -0.31
COL16A1-217ENST00000532877 USP9XQ93008 2570 aaPredicted RBP13.12□□□□□ -0.31
COL16A1-217ENST00000532877 TCRBV5S2A0A599 114 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 TMEM229AB2RXF0 380 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 SCDO00767 359 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 TP53I11O14683 189 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 FADS1O60427 444 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 ZNF682O95780 498 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 F10P00742 488 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 IFNA14P01570 189 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 THBS1P07996 1170 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 NID1P14543 1247 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 IL7RP16871 459 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 CD247P20963 164 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 TBXA2RP21731 343 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 CASRP41180 1078 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 CYB561P49447 251 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 RNF144AP50876 292 aaPredicted RBP13.11□□□□□ -0.31
COL16A1-217ENST00000532877 TUBA3CQ13748 450 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 ELOAQ14241 798 aaKnown RBP13.11□□□□□ -0.31
COL16A1-217ENST00000532877 LIN52Q52LA3 116 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 KLHL26Q53HC5 615 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 MTX3Q5HYI7 312 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 TUBA3EQ6PEY2 450 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 APOOLQ6UXV4 268 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 RTL4Q6ZR62 310 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 CBLL1Q75N03 491 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 EID3Q8N140 333 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 ZNF614Q8N883 585 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 SMYD1Q8NB12 490 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 ZNF527Q8NB42 609 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 POGLUT1Q8NBL1 392 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 SLC26A7Q8TE54 656 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 GRHL3Q8TE85 626 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 RNF138Q8WVD3 245 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 TMCO6Q96DC7 493 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 UTP23Q9BRU9 249 aaKnown RBP13.11□□□□□ -0.31
COL16A1-217ENST00000532877 TRIM45Q9H8W5 580 aaPredicted RBP13.11□□□□□ -0.31
COL16A1-217ENST00000532877 SH2D2AQ9NP31 389 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 OLAHQ9NV23 265 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 RPS6KA6Q9UK32 745 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 ABCG2Q9UNQ0 655 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 IFT52Q9Y366 437 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 DTNAQ9Y4J8 743 aa13.11□□□□□ -0.31
COL16A1-217ENST00000532877 PRAMEF25A6NGN4 478 aa13.1□□□□□ -0.31
COL16A1-217ENST00000532877 AQP12BA6NM10 295 aa13.1□□□□□ -0.31
COL16A1-217ENST00000532877 CLDN24A6NM45 220 aa13.1□□□□□ -0.31
COL16A1-217ENST00000532877 ALG1L2C9J202 215 aa13.1□□□□□ -0.31
COL16A1-217ENST00000532877 CDK2AP1O14519 115 aa13.1□□□□□ -0.31
COL16A1-217ENST00000532877 HPGDP15428 266 aa13.1□□□□□ -0.31
COL16A1-217ENST00000532877 PRKAR1BP31321 381 aa13.1□□□□□ -0.31
COL16A1-217ENST00000532877 CD96P40200 585 aa13.1□□□□□ -0.31
COL16A1-217ENST00000532877 ERFP50548 548 aa13.1□□□□□ -0.31
COL16A1-217ENST00000532877 EEF1A1P68104 462 aaKnown RBP13.1□□□□□ -0.31
COL16A1-217ENST00000532877 OC90Q02509 493 aaPredicted RBP13.1□□□□□ -0.31
COL16A1-217ENST00000532877 CCNIQ14094 377 aa13.1□□□□□ -0.31
COL16A1-217ENST00000532877 LY6DQ14210 128 aa13.1□□□□□ -0.31
COL16A1-217ENST00000532877 FGFBP1Q14512 234 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms