RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 MRPL41Q8IXM3 137 aaKnown RBP13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 CDS1Q92903 461 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 KLHL15Q96M94 604 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 SYT4Q9H2B2 425 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 LIN28AQ9H9Z2 209 aaKnown RBP13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 KCNN3Q9UGI6 736 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 AQP9O43315 295 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 SNNO75324 88 aaPredicted RBP13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 GDF1P27539 372 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 PRLHRP49683 370 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 BDH1Q02338 343 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 VEZF1Q14119 521 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 RPE65Q16518 533 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 PAGE3Q5JUK9 113 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 OR5M10Q6IEU7 315 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 XKR5Q6UX68 686 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 OR52R1Q8NGF1 315 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 SLC6A18Q96N87 628 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 ACTR6Q9GZN1 396 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 SLC7A7Q9UM01 511 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 FESP07332 822 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 LCN1P31025 176 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 LANCL3Q6ZV70 420 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 ARL14Q8N4G2 192 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 ACOT13Q9NPJ3 140 aa13.92□□□□□ -0.18
PCDHA9-202ENST00000532602 LINC01565O15544 149 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 SYT7O43581 403 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 OSMP13725 252 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 ZNF182P17025 639 aaPredicted RBP13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 SLAMF7Q9NQ25 335 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 RIMS3Q9UJD0 308 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 YY2O15391 372 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 SFTPBP07988 381 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 ERP29P30040 261 aaKnown RBP13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 PSPHP78330 225 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 APOFQ13790 326 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 SYT3Q9BQG1 590 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 CCDC86Q9H6F5 360 aaKnown RBP13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 TM7SF3Q9NS93 570 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 TAS2R8Q9NYW2 309 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 UBE2J1Q9Y385 318 aaPredicted RBP13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 RETP07949 1114 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 VASPP50552 380 aaPredicted RBP13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 GLO1Q04760 184 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 CEACAM7Q14002 265 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 RNASE10Q5GAN6 216 aaKnown RBP13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 DCAF12Q5T6F0 453 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 PLBD1Q6P4A8 553 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 ZFP41Q8N8Y5 198 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 GALNT11Q8NCW6 608 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 RRNAD1Q96FB5 475 aaKnown RBP13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 TCTN2Q96GX1 697 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 CHRDQ9H2X0 955 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 NGBQ9NPG2 151 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 TRBV11-1A0A0K0K1C0 115 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 CD8B2A6NJW9 211 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 KCNK5O95279 499 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 IFNA2P01563 188 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 CD8BP10966 210 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 ADRA1AP35348 466 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 ART1P52961 327 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 TRIM46Q7Z4K8 759 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 IGFN1Q86VF2 1251 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 HCAR1Q9BXC0 346 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 ACPTQ9BZG2 426 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 OR51B6Q9H340 312 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 UCKL1Q9NWZ5 548 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 SLC6A14Q9UN76 642 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 A0A1B0GTW7 788 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 AHRP35869 848 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 CD83Q01151 205 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 NTMT1Q9BV86 223 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 ULBP3Q9BZM4 244 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 ARNT2Q9HBZ2 717 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 SDR39U1Q9NRG7 319 aaPredicted RBP13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 PLEKHM1Q9Y4G2 1056 aa13.91□□□□□ -0.18
PCDHA9-202ENST00000532602 DOCK2Q92608 1830 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 C17orf113A0A1B0GUU1 675 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 GALR3O60755 368 aaPredicted RBP13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 PRLP01236 227 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 ABOP16442 354 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 PRKXP51817 358 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 ACTBP60709 375 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 ARF3P61204 181 aaPredicted RBP13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 ACTG1P63261 375 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 ARF1P84077 181 aaKnown RBP13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 FAM160A2Q8N612 972 aaPredicted RBP13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 BCL7CQ8WUZ0 217 aaPredicted RBP13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 GHRLQ9UBU3 117 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 CD79AP11912 226 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 AOAHP28039 575 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 HOXC5Q00444 222 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 ZNF431Q8TF32 576 aaPredicted RBP13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 ZNF480Q8WV37 535 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 ABLIM3O94929 683 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 PPP1R3DO95685 299 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 ZP2Q05996 745 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 TSPYL5Q86VY4 417 aaPredicted RBP13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 OR5AK2Q8NH90 309 aa13.9□□□□□ -0.18
PCDHA9-202ENST00000532602 SFXN5Q8TD22 340 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms