RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 C15orf41Q9Y2V0 281 aa20.34■□□□□ 0.85
LRRK1-208ENST00000532029 DTNAQ9Y4J8 743 aa20.34■□□□□ 0.85
LRRK1-208ENST00000532029 BOD1L1Q8NFC6 3051 aa20.34■□□□□ 0.85
LRRK1-208ENST00000532029 C15orf38-AP3S2A0A0A6YYH1 394 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 ZIC2O95409 532 aaPredicted RBP20.33■□□□□ 0.85
LRRK1-208ENST00000532029 RFPL3SP0C7P2 107 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 ARAFP10398 606 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 ENDOUP21128 410 aaKnown RBP20.33■□□□□ 0.85
LRRK1-208ENST00000532029 MAGEA5P43359 124 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 KRT72Q14CN4 511 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 TOMM20Q15388 145 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 ZNF141Q15928 474 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 KLHL26Q53HC5 615 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 RABL3Q5HYI8 236 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 PDZK1Q5T2W1 519 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 OR5M10Q6IEU7 315 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 HACD2Q6Y1H2 254 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 ARPINQ7Z6K5 226 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 ZNF605Q86T29 641 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 SIAH3Q8IW03 269 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 C10orf111Q8N326 155 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 WDSUB1Q8N9V3 476 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 PHOSPHO1Q8TCT1 267 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 OIT3Q8WWZ8 545 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 PMM1Q92871 262 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 MAL2Q969L2 176 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 HOPXQ9BPY8 73 aaPredicted RBP20.33■□□□□ 0.85
LRRK1-208ENST00000532029 SLX1AQ9BQ83 275 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 ECSITQ9BQ95 431 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 RTN4RQ9BZR6 473 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 DEFB127Q9H1M4 99 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 KAT8Q9H7Z6 458 aaKnown RBP20.33■□□□□ 0.85
LRRK1-208ENST00000532029 MTHFD2LQ9H903 347 aaPredicted RBP20.33■□□□□ 0.85
LRRK1-208ENST00000532029 CACYBPQ9HB71 228 aaKnown RBP20.33■□□□□ 0.85
LRRK1-208ENST00000532029 ARL8BQ9NVJ2 186 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 QPCTLQ9NXS2 382 aa20.33■□□□□ 0.85
LRRK1-208ENST00000532029 EML6Q6ZMW3 1958 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 UGT2B17O75795 530 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 CBR3O75828 277 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 CPA2P48052 419 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 CDK6Q00534 326 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 MAPK11Q15759 364 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 ZNF630Q2M218 657 aaPredicted RBP20.32■□□□□ 0.84
LRRK1-208ENST00000532029 KRTCAP3Q53RY4 240 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 AP1ARQ63HQ0 302 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 OR10A6Q8NH74 314 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 NFKBIDQ8NI38 313 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 BBS10Q8TAM1 723 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 GPR137Q96N19 417 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 TMEM38AQ9H6F2 299 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 RUBCNLQ9H714 662 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 SUCOQ9UBS9 1254 aaKnown RBP20.32■□□□□ 0.84
LRRK1-208ENST00000532029 SEC14L3Q9UDX4 400 aa20.32■□□□□ 0.84
LRRK1-208ENST00000532029 A0A0G2JPF8 293 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 SERINC4A6NH21 518 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 HNRNPCL2B2RXH8 293 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 HNRNPCL3B7ZW38 293 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 GTPBP1O00178 669 aaKnown RBP20.31■□□□□ 0.84
LRRK1-208ENST00000532029 ADAM10O14672 748 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 CDC40O60508 579 aaKnown RBP eCLIP20.31■□□□□ 0.84
LRRK1-208ENST00000532029 HNRNPCL1O60812 293 aaKnown RBP20.31■□□□□ 0.84
LRRK1-208ENST00000532029 TRAPPC6AO75865 159 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 HNRNPCL4P0DMR1 293 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 EDN3P14138 238 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 SLC6A2P23975 617 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 RNF144AP50876 292 aaPredicted RBP20.31■□□□□ 0.84
LRRK1-208ENST00000532029 TDGF1P3P51864 188 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 RBBP4Q09028 425 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 SCARB2Q14108 478 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 SLC10A1Q14973 349 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 CMPK2Q5EBM0 449 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 RPS26P11Q5JNZ5 115 aaPredicted RBP20.31■□□□□ 0.84
LRRK1-208ENST00000532029 PRAMEF8Q5VWM4 474 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 PRAMEF7Q5VXH5 474 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 SERPINA11Q86U17 422 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 PEX5LQ8IYB4 626 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 C11orf65Q8NCR3 313 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 MIB2Q96AX9 1013 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 TREX2Q9BQ50 279 aaPredicted RBP20.31■□□□□ 0.84
LRRK1-208ENST00000532029 SPATA9Q9BWV2 254 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 DSN1Q9H410 356 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 PTGES2Q9H7Z7 377 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 ZDHHC11Q9H8X9 412 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 KCNE5Q9UJ90 142 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 AP3M1Q9Y2T2 418 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 L3MBTL1Q9Y468 752 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 BSNQ9UPA5 3926 aa20.31■□□□□ 0.84
LRRK1-208ENST00000532029 C17orf51A8MQB3 221 aa20.3■□□□□ 0.84
LRRK1-208ENST00000532029 DBIP07108 87 aaKnown RBP20.3■□□□□ 0.84
LRRK1-208ENST00000532029 ESRRAP11474 423 aaPredicted RBP20.3■□□□□ 0.84
LRRK1-208ENST00000532029 MNAT1P51948 309 aa20.3■□□□□ 0.84
LRRK1-208ENST00000532029 CD226Q15762 336 aa20.3■□□□□ 0.84
LRRK1-208ENST00000532029 MAPK14Q16539 360 aa20.3■□□□□ 0.84
LRRK1-208ENST00000532029 REEP3Q6NUK4 255 aa20.3■□□□□ 0.84
LRRK1-208ENST00000532029 HMGN2P46Q86SG4 172 aa20.3■□□□□ 0.84
LRRK1-208ENST00000532029 ATCAYQ86WG3 371 aa20.3■□□□□ 0.84
LRRK1-208ENST00000532029 OR2M3Q8NG83 312 aa20.3■□□□□ 0.84
LRRK1-208ENST00000532029 SH3YL1Q96HL8 342 aaPredicted RBP20.3■□□□□ 0.84
LRRK1-208ENST00000532029 GPATCH1Q9BRR8 931 aaKnown RBP20.3■□□□□ 0.84
LRRK1-208ENST00000532029 QRSL1Q9H0R6 528 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms