RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 KCNK2O95069 426 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 FGF4P08620 206 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 BCKDHAP12694 445 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 TBXA2RP21731 343 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 LCN1P31025 176 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 HOXC12P31275 282 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 CCKARP32238 428 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 UGT2B10P36537 528 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 ASMTP46597 345 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 SGCBQ16585 318 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 DUSP5Q16690 384 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 GALNTL6Q49A17 601 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 ZCCHC12Q6PEW1 402 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 DDIASQ8IXT1 998 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 ZNF610Q8N9Z0 462 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 WFDC11Q8NEX6 87 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 OR6Y1Q8NGX8 325 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 FBXO30Q8TB52 745 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 TWIST2Q8WVJ9 160 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.12■□□□□ 0.01
CPSF1-207ENST00000531727 APOPT1Q96IL0 206 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 MED18Q9BUE0 208 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 C6orf203Q9P0P8 240 aaPredicted RBP15.12■□□□□ 0.01
CPSF1-207ENST00000531727 TRAF6Q9Y4K3 522 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 MTORP42345 2549 aa15.12■□□□□ 0.01
CPSF1-207ENST00000531727 DEFB108AA8MXU0 73 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 TMEM233B4DJY2 109 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 C16orf97H3BN30 126 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 NPHS1O60500 1241 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 AQP8O94778 261 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 CHRNGP07510 517 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 ALOX5P09917 674 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 CRYGSP22914 178 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 ALDH3A1P30838 453 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 KCNJ5P48544 419 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 UGT3A2Q3SY77 523 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 EXOSC6Q5RKV6 272 aaKnown RBP15.11■□□□□ 0.01
CPSF1-207ENST00000531727 FIGNL1Q6PIW4 674 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 FAM214BQ7L5A3 538 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 R3HCC1LQ7Z5L2 792 aaKnown RBP15.11■□□□□ 0.01
CPSF1-207ENST00000531727 ZAR1Q86SH2 424 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 CXorf67Q86X51 503 aaPredicted RBP15.11■□□□□ 0.01
CPSF1-207ENST00000531727 WDR75Q8IWA0 830 aaKnown RBP15.11■□□□□ 0.01
CPSF1-207ENST00000531727 BANPQ8N9N5 519 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 GATSQ8NAP1 163 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 ZBTB8AQ96BR9 441 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 GSX1Q9H4S2 264 aaPredicted RBP15.11■□□□□ 0.01
CPSF1-207ENST00000531727 PROCRQ9UNN8 238 aa15.11■□□□□ 0.01
CPSF1-207ENST00000531727 TLDC2A0PJX2 215 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 C7orf72A4D263 438 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 EIF1AYO14602 144 aaKnown RBP15.1■□□□□ 0.01
CPSF1-207ENST00000531727 PIP5K1BO14986 540 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 DDX5P17844 614 aaKnown RBP15.1■□□□□ 0.01
CPSF1-207ENST00000531727 EFNA1P20827 205 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-207ENST00000531727 HPCAL1P37235 193 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 EIF1AXP47813 144 aaKnown RBP15.1■□□□□ 0.01
CPSF1-207ENST00000531727 SLC6A8P48029 635 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 SERPINB4P48594 390 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 PRIM2P49643 509 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 MLC1Q15049 377 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 PLPPR5Q32ZL2 321 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 ARL13AQ5H913 290 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-207ENST00000531727 LRIG3Q6UXM1 1119 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 TRABD2AQ86V40 505 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 KRTAP1-3Q8IUG1 177 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 GTPBP8Q8N3Z3 284 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-207ENST00000531727 RIBC1Q8N443 379 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-207ENST00000531727 COX18Q8N8Q8 333 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 ACTRT2Q8TDY3 377 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 C16orf58Q96GQ5 468 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 ADGRG7Q96K78 797 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 NPAS1Q99742 590 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 MECRQ9BV79 373 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 PRRG4Q9BZD6 226 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 EML4Q9HC35 981 aaKnown RBP15.1■□□□□ 0.01
CPSF1-207ENST00000531727 UBQLN4Q9NRR5 601 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 SIRT3Q9NTG7 399 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-207ENST00000531727 ZCCHC3Q9NUD5 404 aaKnown RBP15.1■□□□□ 0.01
CPSF1-207ENST00000531727 FBXO34Q9NWN3 711 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 PAQR5Q9NXK6 330 aaPredicted RBP15.1■□□□□ 0.01
CPSF1-207ENST00000531727 ATP6V1HQ9UI12 483 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 ABCA4P78363 2273 aa15.1■□□□□ 0.01
CPSF1-207ENST00000531727 A0A1W2PQD3 144 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 A0A1W2PRB8 838 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 TMEM114B3SHH9 223 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 SCDO00767 359 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 SCAMP2O15127 329 aaKnown RBP15.09■□□□□ 0.01
CPSF1-207ENST00000531727 HSPA4LO95757 839 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 HPGDP15428 266 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 HOXB4P17483 251 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-207ENST00000531727 PSMA4P25789 261 aaKnown RBP15.09■□□□□ 0.01
CPSF1-207ENST00000531727 RPL3P39023 403 aaKnown RBP15.09■□□□□ 0.01
CPSF1-207ENST00000531727 ZNF41P51814 821 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-207ENST00000531727 RAC1P63000 192 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 NKX6-1P78426 367 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-207ENST00000531727 CTU2Q2VPK5 515 aaKnown RBP15.09■□□□□ 0.01
CPSF1-207ENST00000531727 XKR7Q5GH72 579 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 CPTPQ5TA50 214 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 PPP4R4Q6NUP7 873 aa15.09■□□□□ 0.01
CPSF1-207ENST00000531727 ZNF550Q7Z398 422 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms