RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 DTNAQ9Y4J8 743 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 ZFHX4Q86UP3 3567 aa17.48■□□□□ 0.39
SMPD1-205ENST00000531303 DMXL2Q8TDJ6 3036 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 TCRBV3S1A0A5B6 114 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 DHRS12A0PJE2 317 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 C2orf72A6NCS6 295 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 TP53I11O14683 189 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 WDPCPO95876 746 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 LCN1P31025 176 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 EVI2BP34910 448 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 KCNJ5P48544 419 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 CYB561P49447 251 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 CXADRP78310 365 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 NDUFAF6Q330K2 333 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 LIN52Q52LA3 116 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 KLHL26Q53HC5 615 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 MRPL2Q5T653 305 aaKnown RBP17.47■□□□□ 0.39
SMPD1-205ENST00000531303 COMTD1Q86VU5 262 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 CYP4Z2PQ8N1L4 340 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 OR52E4Q8NGH9 312 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 VANGL1Q8TAA9 524 aaPredicted RBP17.47■□□□□ 0.39
SMPD1-205ENST00000531303 PHOSPHO1Q8TCT1 267 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 GRHL3Q8TE85 626 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 CANT1Q8WVQ1 401 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 APOBEC4Q8WW27 367 aaKnown RBP17.47■□□□□ 0.39
SMPD1-205ENST00000531303 TTC9Q92623 222 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 PROX1Q92786 737 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 PMM1Q92871 262 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 PYURFQ96I23 114 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 RNF145Q96MT1 663 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 UTP23Q9BRU9 249 aaKnown RBP17.47■□□□□ 0.39
SMPD1-205ENST00000531303 DOHHQ9BU89 302 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 PINK1Q9BXM7 581 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 METTL7AQ9H8H3 244 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.47■□□□□ 0.39
SMPD1-205ENST00000531303 OLAHQ9NV23 265 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 KLRF1Q9NZS2 232 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 ANAPC2Q9UJX6 822 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 SH3GLB1Q9Y371 365 aa17.47■□□□□ 0.39
SMPD1-205ENST00000531303 SERINC4A6NH21 518 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 C17orf51A8MQB3 221 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 FRS3O43559 492 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 FADS1O60427 444 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 BCAS1O75363 584 aaPredicted RBP17.46■□□□□ 0.39
SMPD1-205ENST00000531303 CYP7B1O75881 506 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 FESP07332 822 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 THBS1P07996 1170 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 NID1P14543 1247 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 PRKAR1BP31321 381 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 CD96P40200 585 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 CASRP41180 1078 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 OR1E2P47887 323 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 HLCSP50747 726 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 UCNP55089 124 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 KCNJ10P78508 379 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 RHDQ02161 417 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 ELOAQ14241 798 aaKnown RBP17.46■□□□□ 0.39
SMPD1-205ENST00000531303 AP1ARQ63HQ0 302 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 ADGRG5Q8IZF4 528 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 POGLUT1Q8NBL1 392 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 RASSF5Q8WWW0 418 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 PYDC1Q8WXC3 89 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 SLC47A1Q96FL8 570 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 RTN4RQ9BZR6 473 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 BAG5Q9UL15 447 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 CHST2Q9Y4C5 530 aa17.46■□□□□ 0.39
SMPD1-205ENST00000531303 TNRC6AQ8NDV7 1962 aaKnown RBP17.46■□□□□ 0.38
SMPD1-205ENST00000531303 A0A087WV48 116 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 PRAMEF25A6NGN4 478 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 G3V3Y1 287 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 M0R3H8 397 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 GMFGO60234 142 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 EPPINO95925 133 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 MT-ND1P03886 318 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 C8BP07358 591 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 PSMA4P25789 261 aaKnown RBP17.45■□□□□ 0.38
SMPD1-205ENST00000531303 CLK3P49761 638 aaKnown RBP17.45■□□□□ 0.38
SMPD1-205ENST00000531303 EEF1A1P68104 462 aaKnown RBP17.45■□□□□ 0.38
SMPD1-205ENST00000531303 TUBA3CQ13748 450 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 CD226Q15762 336 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 PRAMEF20Q5VT98 475 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 SPINK14Q6IE38 97 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 TUBA3EQ6PEY2 450 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 DHRS4L2Q6PKH6 230 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 RTL4Q6ZR62 310 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 MDGA2Q7Z553 956 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 ARSGQ96EG1 525 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 UGT2B28Q9BY64 529 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 GALNT9Q9HCQ5 603 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 LRFN1Q9P244 771 aa17.45■□□□□ 0.38
SMPD1-205ENST00000531303 CHCHD2Q9Y6H1 151 aaPredicted RBP17.45■□□□□ 0.38
SMPD1-205ENST00000531303 H3BNH8 94 aa17.44■□□□□ 0.38
SMPD1-205ENST00000531303 GTPBP1O00178 669 aaKnown RBP17.44■□□□□ 0.38
SMPD1-205ENST00000531303 NDUFB5O43674 189 aa17.44■□□□□ 0.38
SMPD1-205ENST00000531303 CSTAP01040 98 aa17.44■□□□□ 0.38
SMPD1-205ENST00000531303 UBTFL6P0CB48 400 aaPredicted RBP17.44■□□□□ 0.38
SMPD1-205ENST00000531303 CCL3P10147 92 aa17.44■□□□□ 0.38
SMPD1-205ENST00000531303 CHRNB3Q05901 458 aa17.44■□□□□ 0.38
SMPD1-205ENST00000531303 MFAP5Q13361 173 aa17.44■□□□□ 0.38
SMPD1-205ENST00000531303 FGFBP1Q14512 234 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms