RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 FEN1P39748 380 aaKnown RBP8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 CD79BP40259 229 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 PCYT1AP49585 367 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 SUCLG1P53597 346 aaKnown RBP8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 DNAJB13P59910 316 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 RPP38P78345 283 aaKnown RBP8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 MXRA7P84157 204 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 PLCXD2Q0VAA5 305 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 GALNT1Q10472 559 aaPredicted RBP8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 MAP4K2Q12851 820 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 TRAF3Q13114 568 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 GAB1Q13480 694 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 GTF2H2Q13888 395 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 GUSBP1Q15486 140 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 PFKFB4Q16877 469 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 SLC48A1Q6P1K1 146 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 GTF2H2CQ6P1K8 395 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 PODNL1Q6PEZ8 512 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 NPSR1Q6W5P4 371 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 RAPH1Q70E73 1250 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 PLCZ1Q86YW0 608 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 GRAMD2AQ8IUY3 354 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 OR52R1Q8NGF1 315 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 RHEBL1Q8TAI7 183 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 WDR60Q8WVS4 1066 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 TMBIM1Q969X1 311 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 CCDC126Q96EE4 140 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 CNRIP1Q96F85 164 aaPredicted RBP8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 LCORQ96JN0 433 aaPredicted RBP8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 ZNF681Q96N22 645 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 BDH2Q9BUT1 245 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 RTN4RQ9BZR6 473 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 BRINP2Q9C0B6 783 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 WDR41Q9HAD4 459 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 ZBTB26Q9HCK0 441 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 PNPOQ9NVS9 261 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 NDE1Q9NXR1 346 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 NDRG3Q9UGV2 375 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 SLC7A8Q9UHI5 535 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 PRPF19Q9UMS4 504 aaKnown RBP8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 DLGAP4Q9Y2H0 992 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 GPR55Q9Y2T6 319 aaPredicted RBP8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 PCDHA9Q9Y5H5 950 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 ANK2Q01484 3957 aa8.29□□□□□ -1.08
CHMP4A-205ENST00000531158 ALPK2Q86TB3 2170 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 ACOX3O15254 700 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 TSPAN2O60636 221 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 UGDHO60701 494 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 PLAUP00749 431 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 CT45A8P0DMV1 189 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 CT45A9P0DMV2 189 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 PAX1P15863 534 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 PORP16435 677 aaPredicted RBP8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 PCSK2P16519 638 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 DRD5P21918 477 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 CHMP24386 653 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 DIO3P55073 304 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 SIRPAP78324 504 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 GSTA3Q16772 222 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 CT45A2Q5DJT8 189 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 C1orf146Q5VVC0 180 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 PGM2L1Q6PCE3 622 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 ENPP6Q6UWR7 440 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 COMMD6Q7Z4G1 85 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 TMEM151AQ8N4L1 468 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 ZNF781Q8N8C0 355 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 CNEP1R1Q8N9A8 125 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 MAPK1IP1LQ8NDC0 245 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 TM4SF18Q96CE8 201 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 SLC35A4Q96G79 324 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 ZC3HAV1LQ96H79 300 aaKnown RBP8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 SFXN2Q96NB2 322 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 NSUN5Q96P11 429 aaKnown RBP8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 MRPL57Q9BQC6 102 aaKnown RBP8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 CENPKQ9BS16 269 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 THTPAQ9BU02 230 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 MED18Q9BUE0 208 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 GATA5Q9BWX5 397 aaPredicted RBP8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 MRPL46Q9H2W6 279 aaKnown RBP8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 VCX3BQ9H321 246 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 NOL11Q9H8H0 719 aaKnown RBP8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 TCF7L2Q9NQB0 619 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 FARSBQ9NSD9 589 aaKnown RBP8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 ZNF701Q9NV72 531 aaPredicted RBP8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 XPR1Q9UBH6 696 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 BCAP29Q9UHQ4 241 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 ACOT9Q9Y305 439 aa8.28□□□□□ -1.08
CHMP4A-205ENST00000531158 MALRD1Q5VYJ5 2156 aa8.27□□□□□ -1.09
CHMP4A-205ENST00000531158 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.27□□□□□ -1.09
CHMP4A-205ENST00000531158 FRG2CA6NGY1 282 aa8.27□□□□□ -1.09
CHMP4A-205ENST00000531158 OR6C70A6NIJ9 312 aa8.27□□□□□ -1.09
CHMP4A-205ENST00000531158 SLC22A20A6NK97 555 aa8.27□□□□□ -1.09
CHMP4A-205ENST00000531158 PPP6CO00743 305 aa8.27□□□□□ -1.09
CHMP4A-205ENST00000531158 KCNAB3O43448 404 aa8.27□□□□□ -1.09
CHMP4A-205ENST00000531158 KLF4O43474 513 aa8.27□□□□□ -1.09
CHMP4A-205ENST00000531158 ERAL1O75616 437 aaKnown RBP8.27□□□□□ -1.09
CHMP4A-205ENST00000531158 CLDN9O95484 217 aa8.27□□□□□ -1.09
CHMP4A-205ENST00000531158 IFNA2P01563 188 aa8.27□□□□□ -1.09
CHMP4A-205ENST00000531158 CRHP06850 196 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms