RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 SULF2Q8IWU5 870 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 TMEM156Q8N614 296 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 PXT1Q8NFP0 134 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 ABHD11Q8NFV4 315 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 OR10Z1Q8NGY1 313 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 GPR152Q8TDT2 470 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 SPRYD4Q8WW59 207 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 MSLNLQ96KJ4 702 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 CNN2Q99439 309 aaKnown RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 HDHD5Q9BXW7 423 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 PRDM6Q9NQX0 595 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 SMOXQ9NWM0 555 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 ERVW-1Q9UQF0 538 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 DERAQ9Y315 318 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 OR2M5A3KFT3 312 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 UNC119BA6NIH7 251 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 FTCDNL1E5RQL4 147 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 GAPDHSO14556 408 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 CILPO75339 1184 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 SYNGR4O95473 234 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 CLIC3O95833 236 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 PRNPP04156 253 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 DRD1P21728 446 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 NSG1P42857 185 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 SLC11A1P49279 550 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 SP2Q02086 613 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 CAMK2BQ13554 666 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 CYP27C1Q4G0S4 372 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 FLYWCH1Q4VC44 716 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 WSCD1Q658N2 575 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 TMEM225Q6GV28 225 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 SLC35D2Q76EJ3 337 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 STRADAQ7RTN6 431 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 TAS1R3Q7RTX0 852 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 ENDOVQ8N8Q3 282 aaKnown RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 SIDT2Q8NBJ9 832 aaKnown RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 OR5D16Q8NGK9 328 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 TMEM234Q8WY98 164 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 IRGQQ8WZA9 623 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 YIPF5Q969M3 257 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 CMTM7Q96FZ5 175 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 TECTBQ96PL2 329 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 GINS3Q9BRX5 216 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 LINC00597Q9H2U6 94 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 METTL7AQ9H8H3 244 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 AKTIPQ9H8T0 292 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 EBF1Q9UH73 591 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 TBX21Q9UL17 535 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 ROBO3Q96MS0 1386 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 PLIN4Q96Q06 1357 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 A0A1W2PP18 115 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 C9J4A7 227 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 RTCAO00442 366 aaKnown RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 TP53I11O14683 189 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 DPM1O60762 260 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 RASAL1O95294 804 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 ADH1BP00325 375 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 THBS1P07996 1170 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 CTSAP10619 480 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 SLC18A1P54219 525 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 MLLT10P55197 1068 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF239Q16600 458 aaKnown RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 SFRP5Q5T4F7 317 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 TMEM198Q66K66 360 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 METAP1DQ6UB28 335 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 IL17RCQ8NAC3 791 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 STEAP2Q8NFT2 490 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 OR51T1Q8NGJ9 327 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 OR6K2Q8NGY2 324 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 NANOS1Q8WY41 292 aaKnown RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 INTS14Q96SY0 518 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 ARPC5LQ9BPX5 153 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 SLC29A3Q9BZD2 475 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 R3HDMLQ9H3Y0 253 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 ZDHHC3Q9NYG2 299 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 DKKL1Q9UK85 242 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 DDX60Q8IY21 1712 aaKnown RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 LINC01553A4QN01 128 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 PHOX2AO14813 284 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 XRCC3O43542 346 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 DEDDO75618 318 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 TRAPPC6AO75865 159 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 KLF8O95600 359 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 STSP08842 583 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 OR5H8P0DN80 308 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 PFKLP17858 780 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 AOC1P19801 751 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 PRDX3P30048 256 aaKnown RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 CA5AP35218 305 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 MMP12P39900 470 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 PSMB3P49720 205 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 RARRES1P49788 294 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 CASP6P55212 293 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 FMO1Q01740 532 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 SLBPQ14493 270 aaKnown RBP eCLIP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 MLF2Q15773 248 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-229ENST00000531014 C2orf27AQ580R0 203 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 PAGE3Q5JUK9 113 aa6.86□□□□□ -1.31
CTNND1-229ENST00000531014 CARD17Q5XLA6 110 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms