RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 TMEM221A6NGB7 291 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 PIP5K1CO60331 668 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 GALR3O60755 368 aaPredicted RBP16.01■□□□□ 0.15
BRCA2-204ENST00000530893 ATP6V1G1O75348 118 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 CH25HO95992 272 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 HLA-DPB1P04440 258 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 SPNP16150 400 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 TPTEP56180 551 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 UBE2IP63279 158 aaKnown RBP16.01■□□□□ 0.15
BRCA2-204ENST00000530893 MXD1Q05195 221 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 SELENBP1Q13228 472 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 PRICKLE4Q2TBC4 344 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 ARMC4Q5T2S8 1044 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 XKRXQ6PP77 449 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 Q6ZSR6 202 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 OR52L1Q8NGH7 329 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 EFHD2Q96C19 240 aaPredicted RBP16.01■□□□□ 0.15
BRCA2-204ENST00000530893 CD180Q99467 661 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 UBQLN3Q9H347 655 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 CD93Q9NPY3 652 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 C14orf119Q9NWQ9 140 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 ITGB1BP2Q9UKP3 347 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 CLCA2Q9UQC9 943 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 TMEM5Q9Y2B1 443 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 GRIP1Q9Y3R0 1128 aa16.01■□□□□ 0.15
BRCA2-204ENST00000530893 UNC119BA6NIH7 251 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 H3BQ06 376 aaPredicted RBP16■□□□□ 0.15
BRCA2-204ENST00000530893 CDC42EP2O14613 210 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 FGF17O60258 216 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 DNAJB6O75190 326 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 APOL3O95236 402 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 NTN1O95631 604 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 EIF2S1P05198 315 aaKnown RBP16■□□□□ 0.15
BRCA2-204ENST00000530893 NT5EP21589 574 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 SDC2P34741 201 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 BDH1Q02338 343 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 ZNF79Q15937 498 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 GLYR1Q49A26 553 aaPredicted RBP16■□□□□ 0.15
BRCA2-204ENST00000530893 CCNJQ5T5M9 372 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 MRPL2Q5T653 305 aaKnown RBP16■□□□□ 0.15
BRCA2-204ENST00000530893 ABI3BPQ7Z7G0 1075 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 GALNT12Q8IXK2 581 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 GDPD1Q8N9F7 314 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 KATNB1Q9BVA0 655 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 SYNDIG1Q9H7V2 258 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 INIPQ9NRY2 104 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 ZNF223Q9UK11 482 aaPredicted RBP16■□□□□ 0.15
BRCA2-204ENST00000530893 TBC1D24Q9ULP9 559 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 COL4A2P08572 1712 aa16■□□□□ 0.15
BRCA2-204ENST00000530893 C10orf142B7Z368 130 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 LDB3O75112 727 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 GUSBP08236 651 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 BMP7P18075 431 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 GPR50Q13585 617 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 OR1Q1Q15612 314 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 MAPK14Q16539 360 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 TMEM92Q6UXU6 159 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 CXXC5Q7LFL8 322 aaKnown RBP15.99■□□□□ 0.15
BRCA2-204ENST00000530893 LHFPL3Q86UP9 236 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 C11orf74Q86VG3 221 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 CDK20Q8IZL9 346 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 OR4F15Q8NGB8 312 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 TMEM239Q8WW34 195 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 CTHRC1Q96CG8 243 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 SAMD8Q96LT4 415 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 HS6ST2Q96MM7 605 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 ZNF649Q9BS31 505 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 OR52D1Q9H346 318 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 ABCB9Q9NP78 766 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 SACM1LQ9NTJ5 587 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 TMEM74BQ9NUR3 256 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 HRASLS2Q9NWW9 162 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 ASB6Q9NWX5 421 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 SIDT1Q9NXL6 827 aaKnown RBP15.99■□□□□ 0.15
BRCA2-204ENST00000530893 MAT2BQ9NZL9 334 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 TNFRSF10DQ9UBN6 386 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 MUTYHQ9UIF7 546 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 POLHQ9Y253 713 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 MRPS2Q9Y399 296 aaKnown RBP15.99■□□□□ 0.15
BRCA2-204ENST00000530893 CENPVL1A0A0U1RR11 272 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 A0A1W2PQL4 384 aaPredicted RBP15.99■□□□□ 0.15
BRCA2-204ENST00000530893 ZNF860A6NHJ4 632 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 PRAMEF26H0Y7S4 382 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 J3QRE1 110 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 DYRK3O43781 588 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 BRINP1O60477 761 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 RCBTB2O95199 551 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 CFL1P23528 166 aaKnown RBP15.99■□□□□ 0.15
BRCA2-204ENST00000530893 ATP6V1E1P36543 226 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 POU6F2P78424 691 aaPredicted RBP15.99■□□□□ 0.15
BRCA2-204ENST00000530893 FABP5Q01469 135 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 SCN1BQ07699 218 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 ZNF155Q12901 538 aaPredicted RBP15.99■□□□□ 0.15
BRCA2-204ENST00000530893 ZNF613Q6PF04 617 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 TMPRSS11FQ6ZWK6 438 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 SHFQ7M4L6 423 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 CA13Q8N1Q1 262 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 CSNK1A1LQ8N752 337 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 IL17RDQ8NFM7 739 aa15.99■□□□□ 0.15
BRCA2-204ENST00000530893 FANK1Q8TC84 345 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms