RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 TMEM114B3SHH9 223 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 NPHS1O60500 1241 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 OXSR1O95747 527 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-204ENST00000530395 ALOX5P09917 674 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 CD8BP10966 210 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 ACP2P11117 423 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 HPGDP15428 266 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 TBXA2RP21731 343 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 MAPK1P28482 360 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 LCN1P31025 176 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 RPL3P39023 403 aaKnown RBP18.8■□□□□ 0.6
SMPD1-204ENST00000530395 SERPINB4P48594 390 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMPD1-204ENST00000530395 TMEM44Q2T9K0 475 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 PPP4R4Q6NUP7 873 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 ZNF474Q6S9Z5 364 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-204ENST00000530395 LRIG3Q6UXM1 1119 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 RIBC1Q8N443 379 aaPredicted RBP18.8■□□□□ 0.6
SMPD1-204ENST00000530395 COX18Q8N8Q8 333 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 TWIST2Q8WVJ9 160 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 GIMAP5Q96F15 307 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 PRRG4Q9BZD6 226 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 KLHL28Q9NXS3 571 aa18.8■□□□□ 0.6
SMPD1-204ENST00000530395 SHISA8B8ZZ34 492 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 EIF1AYO14602 144 aaKnown RBP18.79■□□□□ 0.6
SMPD1-204ENST00000530395 CTIFO43310 598 aaKnown RBP18.79■□□□□ 0.6
SMPD1-204ENST00000530395 HSPA4LO95757 839 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 FGF4P08620 206 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 CD53P19397 219 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 UGT2B10P36537 528 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 EIF1AXP47813 144 aaKnown RBP18.79■□□□□ 0.6
SMPD1-204ENST00000530395 PRIM2P49643 509 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 ZNF41P51814 821 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-204ENST00000530395 MFSD12Q6NUT3 480 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 FIGNL1Q6PIW4 674 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 FAM214BQ7L5A3 538 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 GALNT10Q86SR1 603 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 GGNQ86UU5 652 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 MISPQ8IVT2 679 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 WDR75Q8IWA0 830 aaKnown RBP18.79■□□□□ 0.6
SMPD1-204ENST00000530395 SLC16A11Q8NCK7 471 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 JADE3Q92613 823 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 ZBTB8AQ96BR9 441 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 WFIKKN1Q96NZ8 548 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 UBQLN4Q9NRR5 601 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 PAQR5Q9NXK6 330 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-204ENST00000530395 EMC9Q9Y3B6 208 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 TRAF6Q9Y4K3 522 aa18.79■□□□□ 0.6
SMPD1-204ENST00000530395 A0A1W2PPR1 153 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 TMEM233B4DJY2 109 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 C16orf97H3BN30 126 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 SCDO00767 359 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 PIP5K1BO14986 540 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 KCNK2O95069 426 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 PLGP00747 810 aaPredicted RBP18.78■□□□□ 0.6
SMPD1-204ENST00000530395 CHRNGP07510 517 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 BCKDHAP12694 445 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 ALDH3A1P30838 453 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 MLC1Q15049 377 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 DUSP5Q16690 384 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 KRTAP21-3Q3LHN1 58 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 GTPBP8Q8N3Z3 284 aaPredicted RBP18.78■□□□□ 0.6
SMPD1-204ENST00000530395 BANPQ8N9N5 519 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 GATSQ8NAP1 163 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 OR4C3Q8NH37 302 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 FAM110BQ8TC76 370 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 CHMP6Q96FZ7 201 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 PPP3R2Q96LZ3 170 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 DLL4Q9NR61 685 aa18.78■□□□□ 0.6
SMPD1-204ENST00000530395 C6orf203Q9P0P8 240 aaPredicted RBP18.78■□□□□ 0.6
SMPD1-204ENST00000530395 MCTS1Q9ULC4 181 aaKnown RBP18.78■□□□□ 0.6
SMPD1-204ENST00000530395 C7orf72A4D263 438 aa18.77■□□□□ 0.6
SMPD1-204ENST00000530395 SCAMP2O15127 329 aaKnown RBP18.77■□□□□ 0.6
SMPD1-204ENST00000530395 CGAP01215 116 aa18.77■□□□□ 0.6
SMPD1-204ENST00000530395 CRYGSP22914 178 aa18.77■□□□□ 0.6
SMPD1-204ENST00000530395 ME2P23368 584 aa18.77■□□□□ 0.6
SMPD1-204ENST00000530395 GUSBP1Q15486 140 aa18.77■□□□□ 0.6
SMPD1-204ENST00000530395 ARL13AQ5H913 290 aaPredicted RBP18.77■□□□□ 0.6
SMPD1-204ENST00000530395 WFDC11Q8NEX6 87 aa18.77■□□□□ 0.6
SMPD1-204ENST00000530395 ACTRT2Q8TDY3 377 aa18.77■□□□□ 0.6
SMPD1-204ENST00000530395 FAM120BQ96EK7 910 aaKnown RBP18.77■□□□□ 0.6
SMPD1-204ENST00000530395 C16orf58Q96GQ5 468 aa18.77■□□□□ 0.6
SMPD1-204ENST00000530395 ZCCHC3Q9NUD5 404 aaKnown RBP18.77■□□□□ 0.6
SMPD1-204ENST00000530395 ATP6V1HQ9UI12 483 aa18.77■□□□□ 0.6
SMPD1-204ENST00000530395 A0A1W2PRB8 838 aa18.76■□□□□ 0.59
SMPD1-204ENST00000530395 AQP8O94778 261 aa18.76■□□□□ 0.59
SMPD1-204ENST00000530395 SYNGR4O95473 234 aa18.76■□□□□ 0.59
SMPD1-204ENST00000530395 EFNA1P20827 205 aaPredicted RBP18.76■□□□□ 0.59
SMPD1-204ENST00000530395 CCKARP32238 428 aa18.76■□□□□ 0.59
SMPD1-204ENST00000530395 CTBP2P56545 445 aa18.76■□□□□ 0.59
SMPD1-204ENST00000530395 POU6F2P78424 691 aaPredicted RBP18.76■□□□□ 0.59
SMPD1-204ENST00000530395 IFFO1Q0D2I5 559 aa18.76■□□□□ 0.59
SMPD1-204ENST00000530395 ATP6AP1LQ52LC2 224 aa18.76■□□□□ 0.59
SMPD1-204ENST00000530395 TRABD2AQ86V40 505 aa18.76■□□□□ 0.59
SMPD1-204ENST00000530395 ZNF610Q8N9Z0 462 aa18.76■□□□□ 0.59
SMPD1-204ENST00000530395 OR6K3Q8NGY3 331 aa18.76■□□□□ 0.59
SMPD1-204ENST00000530395 OR10D3Q8NH80 312 aa18.76■□□□□ 0.59
SMPD1-204ENST00000530395 OR2W6PQ8NHA6 318 aa18.76■□□□□ 0.59
SMPD1-204ENST00000530395 CAVIN3Q969G5 261 aa18.76■□□□□ 0.59
SMPD1-204ENST00000530395 PIK3IP1Q96FE7 263 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms