RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 ATOH8Q96SQ7 321 aa10.26□□□□□ -0.77
AMBRA1-207ENST00000529553 NAP1L3Q99457 506 aaPredicted RBP10.26□□□□□ -0.77
AMBRA1-207ENST00000529553 INPP5KQ9BT40 448 aa10.26□□□□□ -0.77
AMBRA1-207ENST00000529553 FAIM2Q9BWQ8 316 aa10.26□□□□□ -0.77
AMBRA1-207ENST00000529553 ALG9Q9H6U8 611 aa10.26□□□□□ -0.77
AMBRA1-207ENST00000529553 CAB39LQ9H9S4 337 aa10.26□□□□□ -0.77
AMBRA1-207ENST00000529553 NMRAL1Q9HBL8 299 aa10.26□□□□□ -0.77
AMBRA1-207ENST00000529553 NPAP1Q9NZP6 1156 aa10.26□□□□□ -0.77
AMBRA1-207ENST00000529553 CCDC189A1A4V9 331 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 OR5H1A6NKK0 313 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 SYCE1LA8MT33 242 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 SUPT3HB4E1H0 165 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 SHISA8B8ZZ34 492 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 PHGDHO43175 533 aaKnown RBP10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 SUPT3HO75486 399 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 CLDN9O95484 217 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 NTN1O95631 604 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 IL33O95760 270 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 ANGPTL1O95841 491 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 CD40P25942 277 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 OR3A2P47893 321 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 PIK3CGP48736 1102 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 ZNF75DP51815 510 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 PSMD4P55036 377 aaKnown RBP10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 PSG6Q00889 435 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 CSTF3Q12996 717 aaKnown RBP10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 PPP1R7Q15435 360 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 ZKSCAN8Q15776 578 aaPredicted RBP10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 ZNF239Q16600 458 aaKnown RBP10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 DECR1Q16698 335 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 ARL13AQ5H913 290 aaPredicted RBP10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 HP1BP3Q5SSJ5 553 aaPredicted RBP10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 USP43Q70EL4 1123 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 SLC43A2Q8N370 569 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 LINC01356Q8N9X3 169 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 FAM110BQ8TC76 370 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 ABHD3Q8WU67 409 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 EXT2Q93063 718 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 GPR22Q99680 433 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 MRPL1Q9BYD6 325 aaKnown RBP10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 TBL1XR1Q9BZK7 514 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 IPPKQ9H8X2 491 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 ANKRA2Q9H9E1 313 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 UTS2RQ9UKP6 389 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 VDAC3Q9Y277 283 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 RNF11Q9Y3C5 154 aa10.25□□□□□ -0.77
AMBRA1-207ENST00000529553 TRIM77I1YAP6 450 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 UBXN8O00124 270 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 NDUFB5O43674 189 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 LYZL6O75951 148 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 OPN1LWP04000 364 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 LTA4HP09960 611 aaKnown RBP10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 COL6A2P12110 1019 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 MTHFD2P13995 350 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 MANFP55145 182 aaKnown RBP10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 RAB10P61026 200 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 ZSWIM7Q19AV6 140 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 SWI5Q1ZZU3 235 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 FRG2Q64ET8 278 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 ZNF662Q6ZS27 426 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 COMMD6Q7Z4G1 85 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 LILRA2Q8N149 483 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 LRRC17Q8N6Y2 441 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 RHEBL1Q8TAI7 183 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 ZNF418Q8TF45 676 aaPredicted RBP10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 C3orf49Q96BT1 292 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 NXNL1Q96CM4 212 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 MTBPQ96DY7 904 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 PBKQ96KB5 322 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 KLHL15Q96M94 604 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 FRG2BQ96QU4 278 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 RBM4Q9BWF3 364 aaKnown RBP10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 BCO1Q9HAY6 547 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 MYNNQ9NPC7 610 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 TNPO3Q9Y5L0 923 aaKnown RBP10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 TRRAPQ9Y4A5 3859 aa10.24□□□□□ -0.77
AMBRA1-207ENST00000529553 TMPRSS2O15393 492 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 COQ9O75208 318 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 NME6O75414 186 aaPredicted RBP10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 LY6HO94772 140 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 CTAGE8P0CG41 777 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 COX5AP20674 150 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 PTMSP20962 102 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 IVDP26440 423 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 MPIP34949 423 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 LIMS1P48059 325 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 ALDH18A1P54886 795 aaKnown RBP10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 LGALS3BPQ08380 585 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 GTF2H2Q13888 395 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 ACAP2Q15057 778 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 C1QTNF12Q5T7M4 302 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 GTF2H2CQ6P1K8 395 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 SHISA2Q6UWI4 295 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 FCRLAQ7L513 359 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 CTAGE4Q8IX94 777 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 OR2W6PQ8NHA6 318 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 SOX7Q9BT81 388 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 TRMOQ9BU70 441 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 ZNF747Q9BV97 191 aa10.23□□□□□ -0.77
AMBRA1-207ENST00000529553 FKRPQ9H9S5 495 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms