RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ZNF440Q8IYI8 595 aa13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 SLC25A45Q8N413 288 aa13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 PROKR2Q8NFJ6 384 aa13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 BORCS5Q969J3 196 aa13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 VMP1Q96GC9 406 aa13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 CCNL2Q96S94 520 aaPredicted RBP13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 GPA33Q99795 319 aa13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 NDC1Q9BTX1 674 aa13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 TSSK6Q9BXA6 273 aa13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 PALMDQ9NP74 551 aa13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 KCNE5Q9UJ90 142 aa13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 MRTO4Q9UKD2 239 aaKnown RBP13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 CLDN16Q9Y5I7 305 aa13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 CDH10Q9Y6N8 788 aa13.69□□□□□ -0.22
ECHDC1-220ENST00000528402 H3BMH7 237 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 M0R082 166 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 PRODHO43272 600 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 AIREO43918 545 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 RCBTB2O95199 551 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 IFNA16P05015 189 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 DCNP07585 359 aaKnown RBP13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 IGFBP1P08833 259 aaPredicted RBP13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 DBTP11182 482 aaKnown RBP13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 TGFBR2P37173 567 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 CLK1P49759 484 aaKnown RBP13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 DCAF7P61962 342 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 BTG2P78543 158 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 MAT1AQ00266 395 aaKnown RBP13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 RAB40BQ12829 278 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 AQP6Q13520 282 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 C1DQ13901 141 aaKnown RBP13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 FGFBP1Q14512 234 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 SPCS2Q15005 226 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 ARMCX4Q5H9R4 360 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 NKAIN2Q5VXU1 208 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 ACSM5Q6NUN0 579 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 GDPGP1Q6ZNW5 385 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 KIF18BQ86Y91 864 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 SLITRK4Q8IW52 837 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 NRMQ8IXM6 262 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 SLC35F3Q8IY50 421 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 LSMEM1Q8N8F7 131 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 BRIX1Q8TDN6 353 aaKnown RBP13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 TMEM239Q8WW34 195 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 S100ZQ8WXG8 99 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 FGF11Q92914 225 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 FAM46AQ96IP4 442 aaKnown RBP13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 PLEKHA8Q96JA3 519 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 ART5Q96L15 291 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 GUCD1Q96NT3 240 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 SLC46A1Q96NT5 459 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 DPYSL5Q9BPU6 564 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 PRR14Q9BWN1 585 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 MND1Q9BWT6 205 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 CHCHD3Q9NX63 227 aaKnown RBP13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 CBLCQ9ULV8 474 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 DIMT1Q9UNQ2 313 aaKnown RBP13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 MED31Q9Y3C7 131 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 A3GALT2U3KPV4 340 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 TRIOBPQ9H2D6 2365 aa13.68□□□□□ -0.22
ECHDC1-220ENST00000528402 UNC119BA6NIH7 251 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 EFCAB7A8K855 629 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 EFCAB9A8MZ26 197 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 PEX12O00623 359 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 DSCR3O14972 297 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 PRKYO43930 277 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 THY1P04216 161 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 GCGRP47871 477 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 RGS6P49758 472 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 CTBP2P56545 445 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 PSPHP78330 225 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 ZNF91Q05481 1191 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 BNIP3Q12983 259 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 DSG2Q14126 1118 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 AMZ1Q400G9 498 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 SYT14P1Q58G82 188 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 ZNF620Q6ZNG0 422 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 TMPRSS11FQ6ZWK6 438 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 ZNF615Q8N8J6 731 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 RCBTB1Q8NDN9 531 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 OR2T33Q8NG76 320 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 LRR1Q96L50 414 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 ZNF582Q96NG8 517 aaPredicted RBP13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 PTCHD1Q96NR3 888 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 PRSS27Q9BQR3 290 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 CNPPD1Q9BV87 410 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 FGF20Q9NP95 211 aaPredicted RBP13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 ISYNA1Q9NPH2 558 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 TBC1D23Q9NUY8 699 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 FBXO34Q9NWN3 711 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 SELENONQ9NZV5 590 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 ZNF223Q9UK11 482 aaPredicted RBP13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 SLC6A14Q9UN76 642 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 BAIAP2Q9UQB8 552 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 SLC35A3Q9Y2D2 325 aa13.67□□□□□ -0.22
ECHDC1-220ENST00000528402 KDM4EB2RXH2 506 aaPredicted RBP13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 NPIPB9F8W1W9 429 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 TGFBR3LH3BV60 316 aa13.66□□□□□ -0.22
ECHDC1-220ENST00000528402 CCRL2O00421 344 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms