RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TSSK3Q96PN8 268 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 CCT8L2Q96SF2 557 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 YIPF4Q9BSR8 244 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 TUBB1Q9H4B7 451 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 CCM2LQ9NUG4 571 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-212ENST00000527887 PAQR5Q9NXK6 330 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-212ENST00000527887 GALNT8Q9NY28 637 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 ZNF337Q9Y3M9 751 aa12.82□□□□□ -0.36
CAPN1-212ENST00000527887 NF1P21359 2839 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 OR2M5A3KFT3 312 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 CASKO14936 926 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 LYPLA1O75608 230 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-212ENST00000527887 TGM6O95932 706 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 FREM3P0C091 2139 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 BCKDHAP12694 445 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 TBXA2RP21731 343 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 ALDH3A1P30838 453 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 PRIM2P49643 509 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 PRKAG1P54619 331 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 RPL38P63173 70 aaKnown RBP12.81□□□□□ -0.36
CAPN1-212ENST00000527887 UGT3A2Q3SY77 523 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 ARL13AQ5H913 290 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-212ENST00000527887 CPLX4Q7Z7G2 160 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 LUZP2Q86TE4 346 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 MARCH3Q86UD3 253 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 NUDCD3Q8IVD9 361 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 DDIASQ8IXT1 998 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 GCNT2Q8N0V5 402 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 LINC01560Q8TB33 94 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 BCAS4Q8TDM0 211 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 ACTRT2Q8TDY3 377 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 TWIST2Q8WVJ9 160 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 SMPDL3BQ92485 455 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 NRGNQ92686 78 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 MS4A4EQ96PG1 132 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 ALPK1Q96QP1 1244 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 PAIP2Q9BPZ3 127 aaKnown RBP12.81□□□□□ -0.36
CAPN1-212ENST00000527887 MANSC1Q9H8J5 431 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 GIN1Q9NXP7 522 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 ATP6V1HQ9UI12 483 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 FIS1Q9Y3D6 152 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 PTGDR2Q9Y5Y4 395 aa12.81□□□□□ -0.36
CAPN1-212ENST00000527887 ZFHX3Q15911 3703 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 GXYLT2A0PJZ3 443 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 SH3D21A4FU49 640 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 AKAP10O43572 662 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 NDUFB5O43674 189 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 TGDSO95455 350 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 VIMP08670 466 aaKnown RBP12.8□□□□□ -0.36
CAPN1-212ENST00000527887 ALOX5P09917 674 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 FCGR2AP12318 317 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 ZNF17P17021 662 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 DRD4P21917 467 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 HPCAL1P37235 193 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 RFX3P48380 749 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 STX5Q13190 355 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 TMEM44Q2T9K0 475 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 GRAMD1BQ3KR37 738 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 GALNTL6Q49A17 601 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 ZNF385BQ569K4 471 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 MFSD12Q6NUT3 480 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 PAMR1Q6UXH9 720 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 PIGWQ7Z7B1 504 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 UBQLNLQ8IYU4 475 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 METTL25Q8N6Q8 603 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 PIK3R3Q92569 461 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 SLC9A6Q92581 669 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 CIDECQ96AQ7 238 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-212ENST00000527887 STARD4Q96DR4 205 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 GIMAP5Q96F15 307 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 PRPF18Q99633 342 aaKnown RBP12.8□□□□□ -0.36
CAPN1-212ENST00000527887 SLC39A3Q9BRY0 314 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 RTN4RQ9BZR6 473 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 RNF122Q9H9V4 155 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 EQTNQ9NQ60 294 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 UBQLN4Q9NRR5 601 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 DUSP22Q9NRW4 184 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 ATAD3AQ9NVI7 634 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 ELOVL5Q9NYP7 299 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 FLRT3Q9NZU0 649 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 BAIAP2L1Q9UHR4 511 aa12.8□□□□□ -0.36
CAPN1-212ENST00000527887 HRNRQ86YZ3 2850 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-212ENST00000527887 A0A1W2PQD3 144 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 A0A1W2PRB8 838 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 C7orf72A4D263 438 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 NDUFAB1O14561 156 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 PIP5K1BO14986 540 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 EDF1O60869 148 aaKnown RBP12.79□□□□□ -0.36
CAPN1-212ENST00000527887 KCNK2O95069 426 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 OXSR1O95747 527 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-212ENST00000527887 IGKV1D-16P01601 117 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 RAF1P04049 648 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 CHRNGP07510 517 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 KRT16P08779 473 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 CD8BP10966 210 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 HPGDP15428 266 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 SEC24CP53992 1094 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 CLDN15P56746 228 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 LSM12Q3MHD2 195 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms