RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, human

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-212	ENST00000527805	NDUFB2	O95178	105 aa		13.84	□□□□□ -0.19
ATM-212	ENST00000527805	SPARC	P09486	303 aa		13.84	□□□□□ -0.19
ATM-212	ENST00000527805	RUNX2	Q13950	521 aa		13.84	□□□□□ -0.19
ATM-212	ENST00000527805	SGCA	Q16586	387 aa		13.84	□□□□□ -0.19
ATM-212	ENST00000527805	TST	Q16762	297 aa	Known RBP	13.84	□□□□□ -0.19
ATM-212	ENST00000527805	DUSP19	Q8WTR2	217 aa		13.84	□□□□□ -0.19
ATM-212	ENST00000527805	OR5B2	Q96R09	309 aa		13.84	□□□□□ -0.19
ATM-212	ENST00000527805	SECISBP2	Q96T21	854 aa	Known RBP	13.84	□□□□□ -0.19
ATM-212	ENST00000527805	ABCB9	Q9NP78	766 aa		13.84	□□□□□ -0.19
ATM-212	ENST00000527805	CNOT11	Q9UKZ1	510 aa	Known RBP	13.84	□□□□□ -0.19
ATM-212	ENST00000527805	MYO10	Q9HD67	2058 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805	KRBA1	A5PL33	1030 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805	ANXA2P2	A6NMY6	339 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805		H0YIG0	161 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805		J3KTA2	159 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805	ZNF264	O43296	627 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805	OPN1LW	P04000	364 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805	ANXA2	P07355	339 aa	Known RBP	13.83	□□□□□ -0.19
ATM-212	ENST00000527805	PRKCA	P17252	672 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.83	□□□□□ -0.19
ATM-212	ENST00000527805	MFSD13A	Q14CX5	517 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805	LRIF1	Q5T3J3	769 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805	PRAMEF20	Q5VT98	475 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805	FBXO42	Q6P3S6	717 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805	ZNF773	Q6PK81	442 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.83	□□□□□ -0.19
ATM-212	ENST00000527805	CA13	Q8N1Q1	262 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805	GPR52	Q9Y2T5	361 aa		13.83	□□□□□ -0.19
ATM-212	ENST00000527805	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.83	□□□□□ -0.2
ATM-212	ENST00000527805	IGHV1OR21-1	A0A087WYE8	117 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	OR2T1	O43869	369 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	ABCB7	O75027	752 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	FARS2	O95363	451 aa	Known RBP	13.83	□□□□□ -0.2
ATM-212	ENST00000527805	SERPINA3	P01011	423 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	TLE3	Q04726	772 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	MADCAM1	Q13477	382 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	OR1Q1	Q15612	314 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	ODF4	Q2M2E3	257 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	LRRC69	Q6ZNQ3	347 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	ERI1	Q8IV48	349 aa	Known RBP	13.83	□□□□□ -0.2
ATM-212	ENST00000527805	SH3GL3	Q99963	347 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	ITPA	Q9BY32	194 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	TIMMDC1	Q9NPL8	285 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	SACM1L	Q9NTJ5	587 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	CNOT1	A5YKK6	2376 aa	Known RBP	13.83	□□□□□ -0.2
ATM-212	ENST00000527805	C4orf47	A7E2U8	309 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	CTSV	O60911	334 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	IGHV4-34	P06331	123 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	MNDA	P41218	407 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	PIGF	Q07326	219 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.83	□□□□□ -0.2
ATM-212	ENST00000527805	NRTN	Q99748	197 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	RLIM	Q9NVW2	624 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	ASCC3	Q8N3C0	2202 aa	Known RBP	13.83	□□□□□ -0.2
ATM-212	ENST00000527805	PDX1	P52945	283 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	CTBP2	P56545	445 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	PERM1	Q5SV97	790 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	PRAMEF8	Q5VWM4	474 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	PRAMEF7	Q5VXH5	474 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	PODNL1	Q6PEZ8	512 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	SLITRK4	Q8IW52	837 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	OMA1	Q96E52	524 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	TM9SF2	Q99805	663 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	FANCF	Q9NPI8	374 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805	ZC4H2	Q9NQZ6	224 aa		13.83	□□□□□ -0.2
ATM-212	ENST00000527805		H3BSH0	61 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	RAB36	O95755	333 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	CCNO	P22674	350 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	MAP3K8	P41279	467 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	LHFPL3	Q86UP9	236 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	UXS1	Q8NBZ7	420 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	OR7G1	Q8NGA0	311 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	SNRNP27	Q8WVK2	155 aa	Known RBP	13.82	□□□□□ -0.2
ATM-212	ENST00000527805	TSLP	Q969D9	159 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	BPIFA2	Q96DR5	249 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	TMEM38A	Q9H6F2	299 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	UPB1	Q9UBR1	384 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.82	□□□□□ -0.2
ATM-212	ENST00000527805	PCDH17	O14917	1159 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	DSCR3	O14972	297 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	EFEMP2	O95967	443 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	ZNF43	P17038	809 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	OR12D2	P58182	307 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	DUSP5	Q16690	384 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	ZBED5	Q49AG3	693 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	C1orf94	Q6P1W5	598 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	UBE2Q1	Q7Z7E8	422 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	GALNT6	Q8NCL4	622 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	S100Z	Q8WXG8	99 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	TAMM41	Q96BW9	452 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	HIST1H2AA	Q96QV6	131 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	TMED9	Q9BVK6	235 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	ABCD2	Q9UBJ2	740 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	THSD7B	Q9C0I4	1608 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	SERINC4	A6NH21	518 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	INMT	O95050	263 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	MT-ND5	P03915	603 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	CKMT1A	P12532	417 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	RAB15	P59190	212 aa		13.82	□□□□□ -0.2
ATM-212	ENST00000527805	PLBD1	Q6P4A8	553 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms