RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 HMGB4Q8WW32 186 aa14.27□□□□□ -0.13
USH1C-207ENST00000527720 TM9SF4Q92544 642 aa14.27□□□□□ -0.13
USH1C-207ENST00000527720 KCTD7Q96MP8 289 aa14.27□□□□□ -0.13
USH1C-207ENST00000527720 COQ7Q99807 217 aa14.27□□□□□ -0.13
USH1C-207ENST00000527720 GPR27Q9NS67 375 aa14.27□□□□□ -0.13
USH1C-207ENST00000527720 ZNF223Q9UK11 482 aaPredicted RBP14.27□□□□□ -0.13
USH1C-207ENST00000527720 TMEM131Q92545 1883 aa14.27□□□□□ -0.13
USH1C-207ENST00000527720 TDRD6O60522 2096 aaKnown RBP14.26□□□□□ -0.13
USH1C-207ENST00000527720 CENPVL1A0A0U1RR11 272 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 UNC119BA6NIH7 251 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 BRINP1O60477 761 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 IGHA1P01876 353 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 GAAP10253 952 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 NUDT1P36639 197 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 POU6F2P78424 691 aaPredicted RBP14.26□□□□□ -0.13
USH1C-207ENST00000527720 OR1Q1Q15612 314 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 CD200R1LQ6Q8B3 271 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 QSOX2Q6ZRP7 698 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 GID4Q8IVV7 300 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 TMEFF1Q8IYR6 380 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 GPR151Q8TDV0 419 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 GATAD2BQ8WXI9 593 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 SDHCQ99643 169 aaPredicted RBP14.26□□□□□ -0.13
USH1C-207ENST00000527720 CCDC3Q9BQI4 270 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 FN3KQ9H479 309 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 H2AFY2Q9P0M6 372 aaPredicted RBP14.26□□□□□ -0.13
USH1C-207ENST00000527720 TMEM5Q9Y2B1 443 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 GSTK1Q9Y2Q3 226 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 CDC42EP2O14613 210 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 AQP9O43315 295 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 COQ9O75208 318 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 NKX2-2O95096 273 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 CDRT1O95170 752 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 SLC35E2P0CK97 266 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 GCGRP47871 477 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 SLC9A3P48764 834 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 VSX2P58304 361 aaPredicted RBP14.26□□□□□ -0.13
USH1C-207ENST00000527720 TMPRSS11AQ6ZMR5 421 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 TAF8Q7Z7C8 310 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 OR5T3Q8NGG3 340 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 OR52L1Q8NGH7 329 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 OR52N1Q8NH53 320 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 SETD6Q8TBK2 473 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 TMEM239Q8WW34 195 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 ANKRD9Q96BM1 317 aaPredicted RBP14.26□□□□□ -0.13
USH1C-207ENST00000527720 MSANTD3Q96H12 275 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 TCEAL2Q9H3H9 227 aaPredicted RBP14.26□□□□□ -0.13
USH1C-207ENST00000527720 SEMA6CQ9H3T2 930 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 CBLCQ9ULV8 474 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 CMAHPQ9Y471 501 aa14.26□□□□□ -0.13
USH1C-207ENST00000527720 RGS5O15539 181 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 LYPD3O95274 346 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 DLGAP3O95886 979 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 CH25HO95992 272 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 APOA1P02647 267 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 HTR2AP28223 471 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 ARMC6Q6NXE6 501 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 HSDL2Q6YN16 418 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 SLC44A3Q8N4M1 653 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 KLHL36Q8N4N3 616 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 ASB15Q8WXK1 588 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 HTRA1Q92743 480 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 TMCO6Q96DC7 493 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 SAMD8Q96LT4 415 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 CD180Q99467 661 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 UBQLN3Q9H347 655 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 KCNE5Q9UJ90 142 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 POMT2Q9UKY4 750 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 TRDV1A0A1B0GX56 115 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 PLD2O14939 933 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 AKAP8O43823 692 aaKnown RBP14.25□□□□□ -0.13
USH1C-207ENST00000527720 APOL3O95236 402 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 IMPDH2P12268 514 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 CTSEP14091 401 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 BLKP51451 505 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 HHEXQ03014 270 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 ARMC4Q5T2S8 1044 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 C22orf42Q6IC83 251 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 ZNF613Q6PF04 617 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 C11orf74Q86VG3 221 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 CDK20Q8IZL9 346 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 FAM174AQ8TBP5 190 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 C1GALT1C1Q96EU7 318 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 HS6ST2Q96MM7 605 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 ZNF559Q9BR84 538 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 OR52D1Q9H346 318 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 SIDT1Q9NXL6 827 aaKnown RBP14.25□□□□□ -0.13
USH1C-207ENST00000527720 CLCA2Q9UQC9 943 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 V9GYH0 126 aa14.25□□□□□ -0.13
USH1C-207ENST00000527720 BLACEA4D250 179 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 PEX12O00623 359 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 RCBTB2O95199 551 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 CT62P0C5K7 136 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 MSL3P1P0C860 447 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 THEGLP0DJG4 465 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 PRG2P13727 222 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 BMP7P18075 431 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 DRD5P21918 477 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 GABRA3P34903 492 aa14.24□□□□□ -0.13
USH1C-207ENST00000527720 RPS25P62851 125 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms