RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 DUSP22Q9NRW4 184 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 GKN1Q9NS71 199 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 TMEM74BQ9NUR3 256 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 STMN3Q9NZ72 180 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 PILRAQ9UKJ1 303 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 DIMT1Q9UNQ2 313 aaKnown RBP4.06□□□□□ -1.76
CD44-213ENST00000525209 KLHDC2Q9Y2U9 406 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 TIMM10BQ9Y5J6 103 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 HS3ST3A1Q9Y663 406 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 MYO5BQ9ULV0 1848 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 CDHR2Q9BYE9 1310 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 CNTNAP2Q9UHC6 1331 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 A0A1W2PNV4 684 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 PRSS37A4D1T9 235 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 SHISA7A6NL88 538 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 ERI2A8K979 691 aaKnown RBP4.05□□□□□ -1.76
CD44-213ENST00000525209 VWC2LB2RUY7 222 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 B4DGG1 531 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 E5RGE8 158 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 H0YL77 283 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 FOXN1O15353 648 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 INSIG1O15503 277 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 DENRO43583 198 aaKnown RBP4.05□□□□□ -1.76
CD44-213ENST00000525209 SNAI2O43623 268 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 SH3BGRLO75368 114 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 ETHE1O95571 254 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 MT-CO3P00414 261 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 IFNA6P05013 189 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 GPIP06744 558 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 ADRB1P08588 477 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 ANXA5P08758 320 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 GSTT2P0CG29 244 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 GSTT2BP0CG30 244 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 SLC35E2BP0CK96 405 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 SLC35E2P0CK97 266 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 SMIM10L1P0DMW3 83 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 PSKH1P11801 424 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 ARSBP15848 533 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 TBXA2RP21731 343 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 RPL13P26373 211 aaKnown RBP4.05□□□□□ -1.76
CD44-213ENST00000525209 TEAD1P28347 426 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 CD1CP29017 333 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 ID1P41134 155 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 SLC1A2P43004 574 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 KIR3DL2P43630 455 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 RGRP47804 291 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 PPP3CCP48454 512 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 SERPINB9P50453 376 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 CCR8P51685 355 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 VAMP7P51809 220 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 EFNB2P52799 333 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 CHRNB3Q05901 458 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 C1orf61Q13536 156 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 KPNB1Q14974 876 aaKnown RBP4.05□□□□□ -1.76
CD44-213ENST00000525209 CYTH1Q15438 398 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 ALX1Q15699 326 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 GPR33Q49SQ1 333 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 RAB6CQ53S08 254 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 ZNF542PQ5EBM4 170 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 ABHD17BQ5VST6 288 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 STUMQ69YW2 141 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 UNQ6126/PRO20091Q6UXV3 157 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 CEACAM20Q6UY09 585 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 HDDC2Q7Z4H3 204 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 BCDIN3DQ7Z5W3 292 aaKnown RBP4.05□□□□□ -1.76
CD44-213ENST00000525209 GPBP1Q86WP2 473 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 UEVLDQ8IX04 471 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 KBTBD2Q8IY47 623 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 CLEC4FQ8N1N0 589 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 ZNF786Q8N393 782 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 PRSS35Q8N3Z0 413 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 ARFGAP1Q8N6T3 406 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 NOA1Q8NC60 698 aaKnown RBP4.05□□□□□ -1.76
CD44-213ENST00000525209 NECAP1Q8NC96 275 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 NPEPL1Q8NDH3 523 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 STXBP6Q8NFX7 210 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 OR5M1Q8NGP8 315 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 OR14A16Q8NHC5 309 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 FCAMRQ8WWV6 532 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 HSD17B8Q92506 261 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 TSACCQ96A04 125 aaPredicted RBP4.05□□□□□ -1.76
CD44-213ENST00000525209 RAD51AP1Q96B01 352 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 SMIM10Q96HG1 83 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 HSD17B14Q9BPX1 270 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 CCDC3Q9BQI4 270 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 ZNF251Q9BRH9 671 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 MAP1LC3CQ9BXW4 147 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 SRRQ9GZT4 340 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 LHPPQ9H008 270 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 TOLLIPQ9H0E2 274 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 RAB6CQ9H0N0 254 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 FAM234AQ9H0X4 552 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 SDCBP2Q9H190 292 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 WDR55Q9H6Y2 383 aaPredicted RBP4.05□□□□□ -1.76
CD44-213ENST00000525209 VIPAS39Q9H9C1 493 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 UGT1A10Q9HAW8 530 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 MSL2Q9HCI7 577 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 GALNT9Q9HCQ5 603 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 POLD4Q9HCU8 107 aa4.05□□□□□ -1.76
CD44-213ENST00000525209 C1orf123Q9NWV4 160 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms