RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 ISXQ2M1V0 245 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 SPIN4Q56A73 249 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 ZNF628Q5EBL2 1059 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 C3orf38Q5JPI3 329 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 TMEM255AQ5JRV8 349 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 TBC1D3GQ6DHY5 549 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 TRMT10BQ6PF06 316 aaKnown RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 GSG1LQ6UXU4 331 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 LANCL3Q6ZV70 420 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 MYPOPQ86VE0 399 aaPredicted RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 DNAAF1Q8NEP3 725 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 STXBP6Q8NFX7 210 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 PRR7Q8TB68 274 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 LCN9Q8WX39 176 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 CLEC4DQ8WXI8 215 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 NANOS1Q8WY41 292 aaKnown RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 EXTL1Q92935 676 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 TMEM203Q969S6 136 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 FAM120BQ96EK7 910 aaKnown RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 FAM193BQ96PV7 902 aaPredicted RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 MXRA8Q9BRK3 442 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 DDA1Q9BW61 102 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 HIPK2Q9H2X6 1198 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 FKRPQ9H9S5 495 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 C2orf42Q9NWW7 574 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 PSORS1C1Q9UIG5 152 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 ACSL6Q9UKU0 697 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 KCTD3Q9Y597 815 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 COL1A1P02452 1464 aaPredicted RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 COL1A2P08123 1366 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 OR2W5A6NFC9 320 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 A6NIZ1 184 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 OR2AG2A6NM03 316 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 SERPINE3A8MV23 424 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 ZNF670-ZNF695F2Z2N8 137 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 ATP6AP2O75787 350 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 CST1P01037 141 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 TYRP14679 529 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 NME1P15531 152 aaKnown RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 HRH2P25021 359 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 NDUFS1P28331 727 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 MNDAP41218 407 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 MAGEA12P43365 314 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 RAG2P55895 527 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 PPP2CBP62714 309 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 PPP2CAP67775 309 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 TGM3Q08188 693 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 ARSJQ5FYB0 599 aaPredicted RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 MRPL52Q86TS9 123 aaKnown RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 PDZD3Q86UT5 571 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 CNTN4Q8IWV2 1026 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 HSD17B11Q8NBQ5 300 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 SLC25A46Q96AG3 418 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 LRRC58Q96CX6 371 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 MALSU1Q96EH3 234 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 DDOQ99489 341 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 MRPL13Q9BYD1 178 aaKnown RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 ANKRA2Q9H9E1 313 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 MKKSQ9NPJ1 570 aaPredicted RBP7.79□□□□□ -1.16
HMGB4-204ENST00000522796 CENPMQ9NSP4 180 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 FZD10Q9ULW2 581 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 PKP3Q9Y446 797 aa7.79□□□□□ -1.16
HMGB4-204ENST00000522796 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.78□□□□□ -1.16
HMGB4-204ENST00000522796 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.78□□□□□ -1.16
HMGB4-204ENST00000522796 IFITM10A6NMD0 228 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 TCF21O43680 179 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 SUSD5O60279 629 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 C1GALT1C1LP0DN25 315 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 INSRRP14616 1297 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 AKAP5P24588 427 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 CERS1P27544 350 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 GRK4P32298 578 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 THPOP40225 353 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 OR2B8PP59922 312 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 PPP3R1P63098 170 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 MAMLD1Q13495 774 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 SCARF1Q14162 830 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 ZNF660Q6AZW8 331 aaPredicted RBP7.78□□□□□ -1.16
HMGB4-204ENST00000522796 MOB3CQ70IA8 216 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 HS3ST5Q8IZT8 346 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 RTL3Q8N8U3 475 aaKnown RBP7.78□□□□□ -1.16
HMGB4-204ENST00000522796 NPRL2Q8WTW4 380 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 SENP5Q96HI0 755 aaPredicted RBP7.78□□□□□ -1.16
HMGB4-204ENST00000522796 CPB2Q96IY4 423 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 SEC11CQ9BY50 192 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 METTL17Q9H7H0 456 aaPredicted RBP7.78□□□□□ -1.16
HMGB4-204ENST00000522796 B3GAT2Q9NPZ5 323 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 MIEF1Q9NQG6 463 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 PNO1Q9NRX1 252 aaKnown RBP7.78□□□□□ -1.16
HMGB4-204ENST00000522796 HIF1ANQ9NWT6 349 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 CD84Q9UIB8 345 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 DKKL1Q9UK85 242 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 GABRQQ9UN88 632 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 EXO1Q9UQ84 846 aaKnown RBP7.78□□□□□ -1.16
HMGB4-204ENST00000522796 SSUH2Q9Y2M2 353 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 PCDHA11Q9Y5I1 949 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 A0A096LPI6 279 aa7.78□□□□□ -1.16
HMGB4-204ENST00000522796 A0A0A6YYC8 382 aaPredicted RBP7.78□□□□□ -1.16
HMGB4-204ENST00000522796 I3L1I5 382 aaPredicted RBP7.78□□□□□ -1.16
HMGB4-204ENST00000522796 CDC14BO60729 498 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms