RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 RFX3P48380 749 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 RRADP55042 308 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 EEF1A1P68104 462 aaKnown RBP12.02□□□□□ -0.49
CPNE3-205ENST00000522240 Q0VFX4 171 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 AIMP2Q13155 320 aaKnown RBP12.02□□□□□ -0.49
CPNE3-205ENST00000522240 MAPK14Q16539 360 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 NRF1Q16656 503 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 DUSP7Q16829 419 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 DCAF10Q5QP82 559 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 TCTN3Q6NUS6 607 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 H3F3CQ6NXT2 135 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 ZNF836Q6ZNA1 936 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 FKBP9P1Q75LS8 142 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 PIWIL3Q7Z3Z3 882 aaKnown RBP12.02□□□□□ -0.49
CPNE3-205ENST00000522240 VRK2Q86Y07 508 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 ZDHHC21Q8IVQ6 265 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 PRR22Q8IZ63 422 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 PQLC1Q8N2U9 271 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 KCNE4Q8WWG9 221 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 SLC35B4Q969S0 331 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 EFHD2Q96C19 240 aaPredicted RBP12.02□□□□□ -0.49
CPNE3-205ENST00000522240 C7orf34Q96L11 122 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 KRTAP3-3Q9BYR6 98 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 KRTAP3-2Q9BYR7 98 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 DPH1Q9BZG8 443 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 IL1RAPQ9NPH3 570 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 UBQLN4Q9NRR5 601 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 KLHL28Q9NXS3 571 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 C6orf203Q9P0P8 240 aaPredicted RBP12.02□□□□□ -0.49
CPNE3-205ENST00000522240 KCNE5Q9UJ90 142 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 ABCG2Q9UNQ0 655 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 SLC9A8Q9Y2E8 581 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 YARS2Q9Y2Z4 477 aaKnown RBP12.02□□□□□ -0.49
CPNE3-205ENST00000522240 NPIPA5A0A0B4J1W7 369 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 CENPVL1A0A0U1RR11 272 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 A0A1W2PQD3 144 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 NPIPA7E9PJI5 369 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 H0Y3Z8 333 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 WWP2O00308 870 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 UTS2O95399 124 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 OXSR1O95747 527 aaPredicted RBP12.01□□□□□ -0.49
CPNE3-205ENST00000522240 NPIPA8P0DM63 369 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 CYP4B1P13584 511 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 ANPEPP15144 967 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 TBXA2RP21731 343 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 FASP25445 335 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 ADH7P40394 386 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 MLF1P58340 268 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 CDC20Q12834 499 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 FGFBP1Q14512 234 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 GRAMD1BQ3KR37 738 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 PDZK1Q5T2W1 519 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 FBXW10Q5XX13 1052 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 OPN5Q6U736 354 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 GRAMD2AQ8IUY3 354 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 TMEM102Q8N9M5 508 aaPredicted RBP12.01□□□□□ -0.49
CPNE3-205ENST00000522240 CLEC1AQ8NC01 280 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 OR10Q1Q8NGQ4 319 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 THAP3Q8WTV1 239 aaPredicted RBP12.01□□□□□ -0.49
CPNE3-205ENST00000522240 RNF138Q8WVD3 245 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 TTC9Q92623 222 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 ZG16BQ96DA0 208 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 RASL10BQ96S79 203 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 ADOQ96SZ5 270 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 ARHGDIGQ99819 225 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 CHID1Q9BWS9 393 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 RSPO3Q9BXY4 272 aaPredicted RBP12.01□□□□□ -0.49
CPNE3-205ENST00000522240 ATP13A2Q9NQ11 1180 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.01□□□□□ -0.49
CPNE3-205ENST00000522240 RIMS3Q9UJD0 308 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 SLC13A4Q9UKG4 626 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 SLC35A3Q9Y2D2 325 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 DTNAQ9Y4J8 743 aa12.01□□□□□ -0.49
CPNE3-205ENST00000522240 CDHR4A6H8M9 788 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 SCDO00767 359 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 CDK2AP1O14519 115 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 TLX3O43711 291 aaPredicted RBP12□□□□□ -0.49
CPNE3-205ENST00000522240 TPST1O60507 370 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 DPM1O60762 260 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 ICOSLGO75144 302 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 UGT2B11O75310 529 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 DEAF1O75398 565 aaPredicted RBP12□□□□□ -0.49
CPNE3-205ENST00000522240 ITGA10O75578 1167 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 TIPRLO75663 272 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 OR2J2O76002 312 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 EPPINO95925 133 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 IFNW1P05000 195 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 ITGA2P17301 1181 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 ENDOUP21128 410 aaKnown RBP12□□□□□ -0.49
CPNE3-205ENST00000522240 SSR4P51571 173 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 VLDLRP98155 873 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 ATP6AP1Q15904 470 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 NTRK2Q16620 822 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 GLIPR1L2Q4G1C9 344 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 KLHL26Q53HC5 615 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 MRPL2Q5T653 305 aaKnown RBP12□□□□□ -0.49
CPNE3-205ENST00000522240 FNDC7Q5VTL7 733 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 TMEM81Q6P7N7 255 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 NUP54Q7Z3B4 507 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 RPS19BP1Q86WX3 136 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms