RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 C7orf72A4D263 438 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 ADAMDEC1O15204 470 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 NDUFB5O43674 189 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 CXCL13O43927 109 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 CRLF1O75462 422 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 PLAUP00749 431 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 IGKV1D-16P01601 117 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 ABHD2P08910 425 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 PRPS2P11908 318 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 PSMB1P20618 241 aaKnown RBP13.31□□□□□ -0.28
PRKDC-204ENST00000521331 ME2P23368 584 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 ZNF41P51814 821 aaPredicted RBP13.31□□□□□ -0.28
PRKDC-204ENST00000521331 NAA20P61599 178 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 RPS4XP62701 263 aaKnown RBP13.31□□□□□ -0.28
PRKDC-204ENST00000521331 SLC29A2Q14542 456 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 ETFDHQ16134 617 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 CTU2Q2VPK5 515 aaKnown RBP13.31□□□□□ -0.28
PRKDC-204ENST00000521331 PDSS1Q5T2R2 415 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 ESPNLQ6ZVH7 1005 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 TRIM46Q7Z4K8 759 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 GALNT10Q86SR1 603 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 EXOC3L1Q86VI1 746 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 MISPQ8IVT2 679 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 CNPY4Q8N129 248 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 OR2V1Q8NHB1 315 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 GPR151Q8TDV0 419 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 ACMSDQ8TDX5 336 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 ACTRT2Q8TDY3 377 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 AKAP1Q92667 903 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRKDC-204ENST00000521331 HOXB13Q92826 284 aaPredicted RBP13.31□□□□□ -0.28
PRKDC-204ENST00000521331 CCDC126Q96EE4 140 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 METTL2AQ96IZ6 378 aaKnown RBP13.31□□□□□ -0.28
PRKDC-204ENST00000521331 TACO1Q9BSH4 297 aaKnown RBP13.31□□□□□ -0.28
PRKDC-204ENST00000521331 GSTO2Q9H4Y5 243 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 EQTNQ9NQ60 294 aa13.31□□□□□ -0.28
PRKDC-204ENST00000521331 A0A1W2PRB8 838 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 ZNF500O60304 480 aaPredicted RBP13.3□□□□□ -0.28
PRKDC-204ENST00000521331 RSL1D1O76021 490 aaKnown RBP13.3□□□□□ -0.28
PRKDC-204ENST00000521331 NKX2-2O95096 273 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 OXSR1O95747 527 aaPredicted RBP13.3□□□□□ -0.28
PRKDC-204ENST00000521331 TUBBP07437 444 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 GSTA1P08263 222 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 PABPC4LP0CB38 370 aaKnown RBP13.3□□□□□ -0.28
PRKDC-204ENST00000521331 ECHS1P30084 290 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 LCN1P31025 176 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 MAP3K8P41279 467 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 FOXA1P55317 472 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 TNK1Q13470 666 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 WHAMMP3Q1A5X7 153 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 GLE1Q53GS7 698 aaKnown RBP13.3□□□□□ -0.28
PRKDC-204ENST00000521331 CPTPQ5TA50 214 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 HBMQ6B0K9 141 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 ADAM5Q6NVV9 412 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 NOXRED1Q6NXP6 359 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 C17orf53Q8N3J3 647 aaPredicted RBP13.3□□□□□ -0.28
PRKDC-204ENST00000521331 CCNYL1Q8N7R7 359 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 CDRT4Q8N9R6 151 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 STEAP2Q8NFT2 490 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 CEP70Q8NHQ1 597 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 PIK3R3Q92569 461 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 SLC9A6Q92581 669 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 ZNF764Q96H86 408 aaPredicted RBP13.3□□□□□ -0.28
PRKDC-204ENST00000521331 RNF145Q96MT1 663 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 HDHD5Q9BXW7 423 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 MED17Q9NVC6 651 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 ADAM21Q9UKJ8 722 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 LAMP3Q9UQV4 416 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 SNX8Q9Y5X2 465 aa13.3□□□□□ -0.28
PRKDC-204ENST00000521331 SONP18583 2426 aaKnown RBP13.3□□□□□ -0.28
PRKDC-204ENST00000521331 UBFD1O14562 309 aaKnown RBP13.29□□□□□ -0.28
PRKDC-204ENST00000521331 TNFSF11O14788 317 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 PDPK1O15530 556 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 RRP9O43818 475 aaKnown RBP13.29□□□□□ -0.28
PRKDC-204ENST00000521331 CRCPO75575 148 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 SOX30O94993 753 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 PSMA4P25789 261 aaKnown RBP13.29□□□□□ -0.28
PRKDC-204ENST00000521331 GCAP28676 217 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 AGTR1P30556 359 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 GPC1P35052 558 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 DMTNQ08495 405 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 HSPB3Q12988 150 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 CAPRIN1Q14444 709 aaKnown RBP13.29□□□□□ -0.28
PRKDC-204ENST00000521331 CLEC12BQ2HXU8 276 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 PLPPR5Q32ZL2 321 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 ZNF551Q7Z340 670 aaPredicted RBP13.29□□□□□ -0.28
PRKDC-204ENST00000521331 OR6Y1Q8NGX8 325 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 OR4C3Q8NH37 302 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 ZFP28Q8NHY6 868 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 TRMT61AQ96FX7 289 aaKnown RBP13.29□□□□□ -0.28
PRKDC-204ENST00000521331 REPIN1Q9BWE0 567 aaKnown RBP13.29□□□□□ -0.28
PRKDC-204ENST00000521331 NGBQ9NPG2 151 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 RNF115Q9Y4L5 304 aa13.29□□□□□ -0.28
PRKDC-204ENST00000521331 A0A0J9YW62 118 aa13.28□□□□□ -0.28
PRKDC-204ENST00000521331 OPN1LWP04000 364 aa13.28□□□□□ -0.28
PRKDC-204ENST00000521331 HPGDP15428 266 aa13.28□□□□□ -0.28
PRKDC-204ENST00000521331 EIF1P41567 113 aaKnown RBP13.28□□□□□ -0.28
PRKDC-204ENST00000521331 CARD18P57730 90 aa13.28□□□□□ -0.28
PRKDC-204ENST00000521331 SLC18A2Q05940 514 aa13.28□□□□□ -0.28
PRKDC-204ENST00000521331 ZNF844Q08AG5 666 aa13.28□□□□□ -0.28
PRKDC-204ENST00000521331 VEZF1Q14119 521 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms