RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 CYS1Q717R9 158 aa6.31□□□□□ -1.4
LDHBP3-201ENST00000514909 UBE2J2Q8N2K1 259 aa6.31□□□□□ -1.4
LDHBP3-201ENST00000514909 ANKRD49Q8WVL7 239 aa6.31□□□□□ -1.4
LDHBP3-201ENST00000514909 TAF15Q92804 592 aaKnown RBP eCLIP6.31□□□□□ -1.4
LDHBP3-201ENST00000514909 C12orf66Q96MD2 445 aa6.31□□□□□ -1.4
LDHBP3-201ENST00000514909 SLC6A7Q99884 636 aa6.31□□□□□ -1.4
LDHBP3-201ENST00000514909 PARD6BQ9BYG5 372 aa6.31□□□□□ -1.4
LDHBP3-201ENST00000514909 RASD1Q9Y272 281 aa6.31□□□□□ -1.4
LDHBP3-201ENST00000514909 MRPS28Q9Y2Q9 187 aaKnown RBP6.31□□□□□ -1.4
LDHBP3-201ENST00000514909 METP08581 1390 aa6.31□□□□□ -1.4
LDHBP3-201ENST00000514909 SNTNA6NMZ2 147 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 MSH4O15457 936 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 TRIM3O75382 744 aaPredicted RBP6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 SORBS2O94875 1100 aaKnown RBP6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 SP1P08047 785 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 IGFBP1P08833 259 aaPredicted RBP6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 ZSCAN5DPP0CG00 497 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 ANXA8P13928 327 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 POU2F1P14859 743 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 PCMT1P22061 227 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 RPL4P36578 427 aaKnown RBP6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 HPCAL1P37235 193 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 BDKRB1P46663 353 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 PRMT2P55345 433 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 RPS8P62241 208 aaKnown RBP6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 ZNF33BQ06732 778 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 RIPPLY1Q0D2K3 151 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 SRSF5Q13243 272 aaKnown RBP6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 DPYSL2Q16555 572 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 PCK2Q16822 640 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 ACER2Q5QJU3 275 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 ARMC12Q5T9G4 340 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 ANXA8L1Q5VT79 327 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 ACSM5Q6NUN0 579 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 CCDC80Q76M96 950 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 FAM228AQ86W67 206 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 CDR2LQ86X02 465 aaPredicted RBP6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 C15orf54Q8N8G6 183 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 ZNF491Q8N8L2 437 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 FAM184AQ8NB25 1140 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 FLVCR1-AS1Q8TAF5 88 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 SLC2A14Q8TDB8 520 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 RPRD1AQ96P16 312 aaPredicted RBP6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 GSDMAQ96QA5 445 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 MTG1Q9BT17 334 aaPredicted RBP6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 OCR1Q9BZK8 76 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 EXO5Q9H790 373 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 ADGRL4Q9HBW9 690 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 THAP10Q9P2Z0 257 aaPredicted RBP6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 SEC14L3Q9UDX4 400 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 MGAT4AQ9UM21 535 aa6.3□□□□□ -1.4
LDHBP3-201ENST00000514909 FRMPD4Q14CM0 1322 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 A0A075B6Q4 140 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 SERTM2A0A1B0GWG4 89 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 NR5A2O00482 541 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 DNALI1O14645 258 aaPredicted RBP6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 NBR2O15453 112 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 TAPBPO15533 448 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 N4BP1O75113 896 aaKnown RBP6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 BBOX1O75936 387 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 TSPAN12O95859 305 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 IGHG3P01860 377 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 AMBPP02760 352 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 RIDAP52758 137 aaKnown RBP6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 MFAP2P55001 183 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 PLOD1Q02809 727 aaPredicted RBP6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 RGS1Q08116 209 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 CALCOCO2Q13137 446 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 FASTKD3Q14CZ7 662 aaKnown RBP6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 ZIC1Q15915 447 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 CTSL3PQ5NE16 218 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 SEL1L2Q5TEA6 688 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 DOK6Q6PKX4 331 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 SERINC5Q86VE9 423 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 IFNEQ86WN2 208 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 M1APQ8TC57 530 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 SSC4DQ8WTU2 575 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 LRRN3Q9H3W5 708 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 RNF41Q9H4P4 317 aaPredicted RBP6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 MCCC2Q9HCC0 563 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 ZNF446Q9NWS9 450 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 THEGQ9P2T0 379 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 ONECUT1Q9UBC0 465 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 LCMT1Q9UIC8 334 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 ZNF221Q9UK13 617 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 ADAM28Q9UKQ2 775 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 GAB2Q9UQC2 676 aa6.29□□□□□ -1.4
LDHBP3-201ENST00000514909 LRRTM2O43300 516 aa6.28□□□□□ -1.4
LDHBP3-201ENST00000514909 CTAG2O75638 210 aa6.28□□□□□ -1.4
LDHBP3-201ENST00000514909 SLITRK3O94933 977 aa6.28□□□□□ -1.4
LDHBP3-201ENST00000514909 F10P00742 488 aa6.28□□□□□ -1.4
LDHBP3-201ENST00000514909 HCKP08631 526 aa6.28□□□□□ -1.4
LDHBP3-201ENST00000514909 WNT2P09544 360 aa6.28□□□□□ -1.4
LDHBP3-201ENST00000514909 ATP5A1P25705 553 aaKnown RBP6.28□□□□□ -1.4
LDHBP3-201ENST00000514909 CAPGP40121 348 aa6.28□□□□□ -1.4
LDHBP3-201ENST00000514909 P2RY1P47900 373 aa6.28□□□□□ -1.4
LDHBP3-201ENST00000514909 SEC61GP60059 68 aa6.28□□□□□ -1.4
LDHBP3-201ENST00000514909 BST1Q10588 318 aa6.28□□□□□ -1.4
LDHBP3-201ENST00000514909 TMEM44Q2T9K0 475 aa6.28□□□□□ -1.4
LDHBP3-201ENST00000514909 SFT2D3Q587I9 215 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms