RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TMPRSS9Q7Z410 1059 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 GDF7Q7Z4P5 450 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 GTF2IRD2Q86UP8 949 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 SLITRK4Q8IW52 837 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 TMEM151BQ8IW70 566 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 SVOPQ8N4V2 548 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 EID2Q8N6I1 236 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 LSMEM1Q8N8F7 131 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 ZSCAN1Q8NBB4 408 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 RCBTB1Q8NDN9 531 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 BPIFB6Q8NFQ5 453 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 OR13F1Q8NGS4 319 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 C16orf52Q8NHV5 167 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 WDR36Q8NI36 951 aaKnown RBP7.75□□□□□ -1.17
RNF4-220ENST00000513578 CNIH3Q8TBE1 160 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 FAM81AQ8TBF8 368 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 GTPBP3Q969Y2 492 aaKnown RBP7.75□□□□□ -1.17
RNF4-220ENST00000513578 TMIGD2Q96BF3 282 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 SLC41A3Q96GZ6 507 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 CCNL2Q96S94 520 aaPredicted RBP7.75□□□□□ -1.17
RNF4-220ENST00000513578 RBCK1Q9BYM8 510 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 POLR1BQ9H9Y6 1135 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 KRCC1Q9NPI7 259 aaPredicted RBP7.75□□□□□ -1.17
RNF4-220ENST00000513578 FBXO34Q9NWN3 711 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 PAK1IP1Q9NWT1 392 aaPredicted RBP7.75□□□□□ -1.17
RNF4-220ENST00000513578 PTTG2Q9NZH5 202 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 RSL24D1Q9UHA3 163 aaKnown RBP7.75□□□□□ -1.17
RNF4-220ENST00000513578 PSORS1C1Q9UIG5 152 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 CBLCQ9ULV8 474 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 ERVK-19Q9WJR5 959 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 PCDHGA5Q9Y5G8 931 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 SNX5Q9Y5X3 404 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 EXPH5Q8NEV8 1989 aa7.75□□□□□ -1.17
RNF4-220ENST00000513578 FASNP49327 2511 aaKnown RBP7.75□□□□□ -1.17
RNF4-220ENST00000513578 ASCC3Q8N3C0 2202 aaKnown RBP7.74□□□□□ -1.17
RNF4-220ENST00000513578 CENPVL1A0A0U1RR11 272 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 HTR3EA5X5Y0 456 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 FRG2CA6NGY1 282 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 CPSF4LA6NMK7 179 aaKnown RBP7.74□□□□□ -1.17
RNF4-220ENST00000513578 CLCA1A8K7I4 914 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 A8MU76 341 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 PRR33A8MZF0 331 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 HRKO00198 91 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 PEX12O00623 359 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 RGS10O43665 173 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 FAM20BO75063 409 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 IL33O95760 270 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 DDAH2O95865 285 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 IGKV1D-16P01601 117 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 THY1P04216 161 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 IFNA16P05015 189 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 GP1BAP07359 652 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 FGF5P12034 268 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 PIPP12273 146 aaPredicted RBP7.74□□□□□ -1.17
RNF4-220ENST00000513578 FPR3P25089 353 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 DCKP27707 260 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 FMO3P31513 532 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 KRT20P35900 424 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 OMPP47874 163 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 EFNB1P98172 346 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 CDK5Q00535 292 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 PLAURQ03405 335 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 TARDBPQ13148 414 aaKnown RBP eCLIP7.74□□□□□ -1.17
RNF4-220ENST00000513578 PMS2P3Q13401 168 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 RAB39AQ14964 217 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 OCLNQ16625 522 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 FLYWCH1Q4VC44 716 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 TRIM61Q5EBN2 209 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 ARHGAP40Q5TG30 622 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 ZNF385CQ66K41 422 aaPredicted RBP7.74□□□□□ -1.17
RNF4-220ENST00000513578 FIGNL1Q6PIW4 674 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 B3GNT6Q6ZMB0 384 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 COX15Q7KZN9 410 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 ZNF550Q7Z398 422 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 P3H2Q8IVL5 708 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 ZNF440Q8IYI8 595 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 METTL27Q8N6F8 245 aaPredicted RBP7.74□□□□□ -1.17
RNF4-220ENST00000513578 BCORP1Q8N888 145 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 POGLUT1Q8NBL1 392 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 C17orf47Q8NEP4 570 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 OR8J1Q8NGP2 316 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 PIGXQ8TBF5 258 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 IFI44Q8TCB0 444 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 ZNF721Q8TF20 911 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.74□□□□□ -1.17
RNF4-220ENST00000513578 DAZLQ92904 295 aaKnown RBP7.74□□□□□ -1.17
RNF4-220ENST00000513578 FGF11Q92914 225 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 MYDGFQ969H8 173 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 MUL1Q969V5 352 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 SENP5Q96HI0 755 aaPredicted RBP7.74□□□□□ -1.17
RNF4-220ENST00000513578 MPP4Q96JB8 637 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 HS6ST2Q96MM7 605 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 Q96MT0 163 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 TSC22D3Q99576 134 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 BCL7BQ9BQE9 202 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 PRSS27Q9BQR3 290 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 CNPPD1Q9BV87 410 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 ITPAQ9BY32 194 aa7.74□□□□□ -1.17
RNF4-220ENST00000513578 POLDIP3Q9BY77 421 aaKnown RBP7.74□□□□□ -1.17
RNF4-220ENST00000513578 TRIM2Q9C040 744 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms