RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 TMEM89A2RUT3 159 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 SERPINE3A8MV23 424 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 TLR4O00206 839 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 SLC7A4O43246 635 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 RIPK2O43353 540 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 STX6O43752 255 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 CXCL14O95715 111 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 GLULP15104 373 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 TBPP20226 339 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 TMOD1P28289 359 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 DHPSP49366 369 aaPredicted RBP1.12□□□□□ -2.23
PDGFC-208ENST00000512711 CASP9P55211 416 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 STX1BP61266 288 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 HERVK_113P61574 105 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 RPL8P62917 257 aaKnown RBP1.12□□□□□ -2.23
PDGFC-208ENST00000512711 MRPS6P82932 125 aaKnown RBP1.12□□□□□ -2.23
PDGFC-208ENST00000512711 CCZ1BP86790 482 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 CCZ1P86791 482 aaPredicted RBP1.12□□□□□ -2.23
PDGFC-208ENST00000512711 MAP2K1Q02750 393 aaPredicted RBP1.12□□□□□ -2.23
PDGFC-208ENST00000512711 C17orf67Q0P5P2 114 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 ZP4Q12836 540 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 SCARB2Q14108 478 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 RCN2Q14257 317 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 ARMC3Q5W041 872 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 LEG1Q6P5S2 330 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 ABHD12BQ7Z5M8 362 aaPredicted RBP1.12□□□□□ -2.23
PDGFC-208ENST00000512711 LCA5Q86VQ0 697 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF695Q8IW36 515 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 LYPD1Q8N2G4 141 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 OR2T33Q8NG76 320 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 OR52I1Q8NGK6 324 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF596Q8TC21 504 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 TMEM158Q8WZ71 300 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 ADIPOR1Q96A54 375 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 SPATA17Q96L03 361 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 CBWD1Q9BRT8 395 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 NDUFAF3Q9BU61 184 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 CHIAQ9BZP6 476 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 TRPV6Q9H1D0 765 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 GHRLQ9UBU3 117 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 FAM153AQ9UHL3 310 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 FBXW2Q9UKT8 454 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 TBX21Q9UL17 535 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 PRPF19Q9UMS4 504 aaKnown RBP1.12□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF835Q9Y2P0 537 aa1.12□□□□□ -2.23
PDGFC-208ENST00000512711 COL5A1P20908 1838 aaPredicted RBP1.11□□□□□ -2.23
PDGFC-208ENST00000512711 A0A0U1RRA0 63 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 TMEM150BA6NC51 233 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 GJE1A6NN92 205 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 C11orf94C9JXX5 98 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 H0YL77 283 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF263O14978 683 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 TIMM44O43615 452 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 BUB1O43683 1085 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 HCN1O60741 890 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 RETP07949 1114 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF286BP0CG31 522 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 GNSP15586 552 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 GCKP35557 465 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 KIR2DS2P43631 304 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 RPS9P46781 194 aaKnown RBP1.11□□□□□ -2.23
PDGFC-208ENST00000512711 MNAT1P51948 309 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 SRYQ05066 204 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 ST3GAL3Q11203 375 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 GGTLC2Q14390 218 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 CDKN3Q16667 212 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 ZSWIM7Q19AV6 140 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 PARP6Q2NL67 630 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 LRIT3Q3SXY7 679 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 CFAP221Q4G0U5 840 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 ACSF3Q4G176 576 aaPredicted RBP1.11□□□□□ -2.23
PDGFC-208ENST00000512711 METTL11BQ5VVY1 283 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 Q5W150 140 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 ZSCAN25Q6NSZ9 544 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 OLFM4Q6UX06 510 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF562Q6V9R5 426 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 DNM1P46Q6ZS02 220 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 GCNT2Q8N0V5 402 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 SFRP1Q8N474 314 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 DEDD2Q8WXF8 326 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 PHYHIPQ92561 330 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 C5orf30Q96GV9 206 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 DESI2Q9BSY9 194 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 TMEM121Q9BTD3 319 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 ING2Q9H160 280 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 MMADHCQ9H3L0 296 aaPredicted RBP1.11□□□□□ -2.23
PDGFC-208ENST00000512711 SH2D2AQ9NP31 389 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 INPP5EQ9NRR6 644 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 RBAKQ9NYW8 714 aaPredicted RBP1.11□□□□□ -2.23
PDGFC-208ENST00000512711 SAMD4AQ9UPU9 718 aaKnown RBP1.11□□□□□ -2.23
PDGFC-208ENST00000512711 MAB21L2Q9Y586 359 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 SLCO1B1Q9Y6L6 691 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 FBN1P35555 2871 aaKnown RBP1.11□□□□□ -2.23
PDGFC-208ENST00000512711 PCM1Q15154 2024 aa1.11□□□□□ -2.23
PDGFC-208ENST00000512711 CABIN1Q9Y6J0 2220 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 NKX2-6A6NCS4 301 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 TMEM110-MUSTN1A8MSY1 372 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF705EA8MWA4 302 aaPredicted RBP1.1□□□□□ -2.23
PDGFC-208ENST00000512711 H0Y626 953 aa1.1□□□□□ -2.23
PDGFC-208ENST00000512711 PES1O00541 588 aaKnown RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms