RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 NOTOA8MTQ0 251 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 FAM171A2A8MVW0 826 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 A8MXE2 369 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 H3BQF6 201 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 PPP6CO00743 305 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 TSPAN2O60636 221 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 HRGP04196 525 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 ANXA4P09525 319 aaPredicted RBP6.49□□□□□ -1.37
USP46-208ENST00000512656 CT45A8P0DMV1 189 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 CT45A9P0DMV2 189 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 ZNF708P17019 499 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 IMPDH1P20839 514 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 TIA1P31483 386 aaKnown RBP eCLIP6.49□□□□□ -1.37
USP46-208ENST00000512656 CPOXP36551 454 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 STARP49675 285 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 CLK3P49761 638 aaKnown RBP6.49□□□□□ -1.37
USP46-208ENST00000512656 PSMD4P55036 377 aaKnown RBP6.49□□□□□ -1.37
USP46-208ENST00000512656 CLDN18P56856 261 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 CORO7P57737 925 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 NAA20P61599 178 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 DUSP2Q05923 314 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 ZNF155Q12901 538 aaPredicted RBP6.49□□□□□ -1.37
USP46-208ENST00000512656 LCP2Q13094 533 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 GANABQ14697 944 aaKnown RBP6.49□□□□□ -1.37
USP46-208ENST00000512656 ZNHIT3Q15649 155 aaPredicted RBP6.49□□□□□ -1.37
USP46-208ENST00000512656 DECR1Q16698 335 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 UNC50Q53HI1 259 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 CT45A2Q5DJT8 189 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 SHEQ5VZ18 495 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 OR5M10Q6IEU7 315 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 FAM180BQ6P0A1 224 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 GALNT18Q6P9A2 607 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 TIFABQ6ZNK6 161 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 RPS27LQ71UM5 84 aaKnown RBP6.49□□□□□ -1.37
USP46-208ENST00000512656 GCNT2Q8N0V5 402 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 SIMC1Q8NDZ2 872 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 C16orf78Q8WTQ4 265 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 CCDC126Q96EE4 140 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 MAP6Q96JE9 813 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 SLC39A3Q9BRY0 314 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 ACPTQ9BZG2 426 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 PTGES2Q9H7Z7 377 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 FOLH1BQ9HBA9 442 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 C3orf14Q9HBI5 128 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 MIEF1Q9NQG6 463 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 DLL4Q9NR61 685 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 PPP4R1LQ9P1A2 415 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 ZNF225Q9UK10 706 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 FBXL2Q9UKC9 423 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 GRID1Q9ULK0 1009 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 ABCG2Q9UNQ0 655 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 WBP11Q9Y2W2 641 aaKnown RBP6.49□□□□□ -1.37
USP46-208ENST00000512656 ATRQ13535 2644 aa6.49□□□□□ -1.37
USP46-208ENST00000512656 ZNF469Q96JG9 3925 aaPredicted RBP6.49□□□□□ -1.37
USP46-208ENST00000512656 ARID1AO14497 2285 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 HIVEP2P31629 2446 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 A0A087WV62 115 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 UQCRHLA0A096LP55 91 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 SLC22A20A6NK97 555 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 TTC36A6NLP5 189 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 KRTAP9-7A8MTY7 169 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 HCRTR2O43614 444 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 DLX3O60479 287 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 ZIC3O60481 467 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 PSPNO60542 156 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 TGM6O95932 706 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 GSTA1P08263 222 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 ABHD2P08910 425 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 SBK3P0C264 359 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 CTAGE8P0CG41 777 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 FCGR2AP12318 317 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 CHN1P15882 459 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 HK1P19367 917 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 CD53P19397 219 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 DDCP20711 480 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 FPR1P21462 350 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 ADSLP30566 484 aaPredicted RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 NTSP30990 170 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 HOXC12P31275 282 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 EVI2BP34910 448 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 CD79BP40259 229 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 NCBP2P52298 156 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP46-208ENST00000512656 PRKAA2P54646 552 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 GAS1P54826 345 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 RPS3AP61247 264 aaKnown RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 RAE1P78406 368 aaKnown RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 NKX6-1P78426 367 aaPredicted RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 OCRLQ01968 901 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 TAGLNQ01995 201 aaKnown RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 ZNF763Q0D2J5 394 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 C2orf80Q0P641 193 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 IMPG1Q17R60 797 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 GLYR1Q49A26 553 aaPredicted RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 SPDYAQ5MJ70 313 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 TCHHL1Q5QJ38 904 aaPredicted RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 SH2D4BQ5SQS7 431 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 UBAP2Q5T6F2 1119 aaKnown RBP6.48□□□□□ -1.37
USP46-208ENST00000512656 RAET1LQ5VY80 246 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 NPSR1Q6W5P4 371 aa6.48□□□□□ -1.37
USP46-208ENST00000512656 TRMT10CQ7L0Y3 403 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms