RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 CUTCQ9NTM9 273 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 IRAK4Q9NWZ3 460 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 IMPAD1Q9NX62 359 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 HCN3Q9P1Z3 774 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 RHCGQ9UBD6 479 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 REV1Q9UBZ9 1251 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 PILRBQ9UKJ0 227 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 HEMK1Q9Y5R4 338 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 SCN3AQ9NY46 2000 aa12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 GOLGA4Q13439 2230 aaKnown RBP12.18□□□□□ -0.46
DEPDC1B-206ENST00000512452 BRINP1O60477 761 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 FCMRO60667 390 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 NOL3O60936 208 aaKnown RBP12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 FAM20BO75063 409 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 OR2B3O76000 313 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 PAX7P23759 505 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 CHMP24386 653 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 CD1CP29017 333 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 FMO3P31513 532 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 TRHRP34981 398 aaPredicted RBP12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 KRT20P35900 424 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 TMBIM6P55061 237 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 SNRPGP62308 76 aaKnown RBP12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 BNC1Q01954 994 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 FUT7Q11130 342 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 BNIP3Q12983 259 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 LSAMPQ13449 338 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 PIN1Q13526 163 aaPredicted RBP12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 PTGES3Q15185 160 aaKnown RBP12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 NR0B2Q15466 257 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 NEDD8Q15843 81 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 DECR1Q16698 335 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 CLPPQ16740 277 aaPredicted RBP12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 GTF2IRD2BQ6EKJ0 949 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 SLC23A3Q6PIS1 610 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 ZNF836Q6ZNA1 936 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 GTF2IRD2Q86UP8 949 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 RANBP3LQ86VV4 465 aaPredicted RBP12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 CLVS1Q8IUQ0 354 aaPredicted RBP12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 ERI1Q8IV48 349 aaKnown RBP12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 GPR135Q8IZ08 494 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 GALNT15Q8N3T1 639 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 OR4K5Q8NGD3 323 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 OR51Q1Q8NH59 317 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 GNPDA2Q8TDQ7 276 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 GPR151Q8TDV0 419 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 APH1BQ8WW43 257 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 FCGR1BQ92637 280 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 MYDGFQ969H8 173 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 GTPBP3Q969Y2 492 aaKnown RBP12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 MMABQ96EY8 250 aaPredicted RBP12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 Q96MT0 163 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 SIGLEC11Q96RL6 698 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 WFDC6Q9BQY6 131 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 ALOXE3Q9BYJ1 711 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 SPRTNQ9H040 489 aaPredicted RBP12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 ZNF768Q9H5H4 540 aaKnown RBP12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 FOLH1BQ9HBA9 442 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 C14orf105Q9NVL8 296 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 FKBP14Q9NWM8 211 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 PRODH2Q9UF12 536 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 MKLN1Q9UL63 735 aa12.17□□□□□ -0.46
DEPDC1B-206ENST00000512452 PI4KAP42356 2102 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 FBN2P35556 2912 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 AHCTF1Q8WYP5 2266 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 TRIM64BA6NI03 449 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 DSCR3O14972 297 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 ANKRD34CP0C6C1 535 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 PCMT1P22061 227 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 GABRA3P34903 492 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 EMDP50402 254 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 TARDBPQ13148 414 aaKnown RBP eCLIP12.16□□□□□ -0.464e-6■■■■□ 21
DEPDC1B-206ENST00000512452 DSG2Q14126 1118 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 EXOSC7Q15024 291 aaKnown RBP12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 TMEM201Q5SNT2 666 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 NKAIN2Q5VXU1 208 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 C12orf73Q69YU5 71 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 QSOX2Q6ZRP7 698 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 PLEKHM3Q6ZWE6 761 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 OLIG3Q7RTU3 272 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 GRAMD2AQ8IUY3 354 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 ZNF540Q8NDQ6 660 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 OR4C6Q8NH72 309 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 ACOT11Q8WXI4 607 aaPredicted RBP12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 ISOC1Q96CN7 298 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 NMD3Q96D46 503 aaKnown RBP12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 ZG16BQ96DA0 208 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 LIN37Q96GY3 246 aaPredicted RBP12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 VSTM2LQ96N03 204 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 MCHR1Q99705 422 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 QRSL1Q9H0R6 528 aaKnown RBP12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 KRCC1Q9NPI7 259 aaPredicted RBP12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 FSCN3Q9NQT6 498 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 PAK1IP1Q9NWT1 392 aaPredicted RBP12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 ZNF226Q9NYT6 803 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 CNOT2Q9NZN8 540 aaKnown RBP12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 PSORS1C1Q9UIG5 152 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 SERTAD3Q9UJW9 196 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 CHST2Q9Y4C5 530 aa12.16□□□□□ -0.46
DEPDC1B-206ENST00000512452 PCDHGA10Q9Y5H3 936 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms