RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	CCDC91	Q7Z6B0	441 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	IQCA1	Q86XH1	822 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	STH	Q8IWL8	128 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	SLC22A18AS	Q8N1D0	253 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	CHCHD4	Q8N4Q1	142 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	NAT8L	Q8N9F0	302 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	DEFB124	Q8NES8	71 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	LPCAT1	Q8NF37	534 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	OR4F5	Q8NH21	305 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	TBCK	Q8TEA7	893 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	GLYATL1	Q969I3	302 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	PNPLA2	Q96AD5	504 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	ZBED6CL	Q96FA7	236 aa	Predicted RBP	4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	C12orf42	Q96LP6	360 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	SPAG8	Q99932	426 aa	Predicted RBP	4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	EDEM2	Q9BV94	578 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	FUNDC2	Q9BWH2	189 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	SLC26A1	Q9H2B4	701 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	RNF41	Q9H4P4	317 aa	Predicted RBP	4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	DCLRE1B	Q9H816	532 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	DDX28	Q9NUL7	540 aa	Known RBP	4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	RCOR3	Q9P2K3	495 aa	Predicted RBP	4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	RSPH14	Q9UHP6	348 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	ATG2B	Q96BY7	2078 aa		4.26	□□□□□ -1.73
LINC01088-208	ENST00000511895	AKAP9	Q99996	3911 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	UMPS	P11172	480 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	CYP3A5	P20815	502 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	PPIA	P62937	165 aa	Known RBP	4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	C17orf58	Q2M2W7	97 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	ZNF674	Q2M3X9	581 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	RNF212	Q495C1	297 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	C14orf28	Q4W4Y0	310 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	LINC00242	Q5T6M2	205 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	WDR25	Q64LD2	544 aa	Predicted RBP	4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	PRSS42	Q7Z5A4	293 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	NAXD	Q8IW45	347 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	FBXW8	Q8N3Y1	598 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	ZNF491	Q8N8L2	437 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	SIDT2	Q8NBJ9	832 aa	Known RBP	4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	VMP1	Q96GC9	406 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	ZBP1	Q9H171	429 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	C2orf40	Q9H1Z8	148 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	TNFRSF19	Q9NS68	423 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	PNPLA3	Q9NST1	481 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	ZCCHC3	Q9NUD5	404 aa	Known RBP	4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	RNF24	Q9Y225	148 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	KIAA1671	Q9BY89	1806 aa		4.25	□□□□□ -1.73
LINC01088-208	ENST00000511895	ADGRA3	Q8IWK6	1321 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	PLXNA4	Q9HCM2	1894 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	PKD1L1	Q8TDX9	2849 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	BSN	Q9UPA5	3926 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	ABCA7	Q8IZY2	2146 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	TXNDC12	O95881	172 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	IGHG3	P01860	377 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	DNAH10OS	P0CZ25	163 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	GYG1	P46976	350 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	SLC7A2	P52569	658 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	CDKL1	Q00532	357 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	GK2	Q14410	553 aa	Predicted RBP	4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	AARD	Q4LEZ3	155 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	IYD	Q6PHW0	289 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	CLEC18B	Q6UXF7	455 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	ARL14	Q8N4G2	192 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	C10orf53	Q8N6V4	93 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	FLVCR1-AS1	Q8TAF5	88 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	RAB3C	Q96E17	227 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	GAN	Q9H2C0	597 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	AMBN	Q9NP70	447 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	MAD2L2	Q9UI95	211 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	FOXA2	Q9Y261	457 aa	Predicted RBP	4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	SNX5	Q9Y5X3	404 aa		4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	MUC22	E2RYF6	1773 aa	Predicted RBP	4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	KIF26A	Q9ULI4	1882 aa	Predicted RBP	4.24	□□□□□ -1.73
LINC01088-208	ENST00000511895	GOLGA4	Q13439	2230 aa	Known RBP	4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	SPAAR	A0A1B0GVQ0	90 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895		A0A1W2PRV1	198 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	FAM170A	A1A519	330 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895		A8MU10	97 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	KLLN	B2CW77	178 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	E2F3	O00716	465 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	ATP6V1G1	O75348	118 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	AKAP3	O75969	853 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	SLC25A27	O95847	323 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	SFTPB	P07988	381 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	P4HA1	P13674	534 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	RPS9	P46781	194 aa	Known RBP	4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	HERV-K104	P63124	156 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	LTB4R	Q15722	352 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	SGCB	Q16585	318 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	SLC39A12	Q504Y0	691 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	STEAP1B	Q6NZ63	245 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	ZNF600	Q6ZNG1	722 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	LINC00518	Q8N0U6	118 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	OR4A16	Q8NH70	328 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	ZNF671	Q8TAW3	534 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	MRAP	Q8TCY5	172 aa		4.23	□□□□□ -1.73
LINC01088-208	ENST00000511895	ST7L	Q8TDW4	575 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms