RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 NDUFB5O43674 189 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 KRT16P08779 473 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 HK1P19367 917 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 UQCRC2P22695 453 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 MSX1P28360 303 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 GCKP35557 465 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 CLDN15P56746 228 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 CLDN18P56856 261 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 DPY19L1Q2PZI1 675 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 TMEM44Q2T9K0 475 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 FAM174BQ3ZCQ3 159 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 KLHL26Q53HC5 615 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 AP1ARQ63HQ0 302 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 ADGRE4PQ86SQ3 457 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 ZNF295-AS1Q8N0V1 137 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 C1GALT1C1Q96EU7 318 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 DTNBP1Q96EV8 351 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 CHMP6Q96FZ7 201 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 C7orf26Q96N11 449 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 SFXN2Q96NB2 322 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 OR52B2Q96RD2 323 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 SDF2Q99470 211 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 TREX2Q9BQ50 279 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 TUBA1CQ9BQE3 449 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 HOXD1Q9GZZ0 328 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 ARGLU1Q9NWB6 273 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 BTNL2Q9UIR0 455 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 ZNF337Q9Y3M9 751 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 ADGRG4Q8IZF6 3080 aa14.61□□□□□ -0.07
PDLIM5-216ENST00000511767 A0A1W2PQD3 144 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 DUXAA6NLW8 204 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 HSPB2A8KAH6 182 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 HMGB1P1B2RPK0 211 aaPredicted RBP14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 E9PBE3 544 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 SASH3O75995 380 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 SNRPB2P08579 225 aaKnown RBP14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 ZNF708P17019 499 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 RPS26P62854 115 aaKnown RBP14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 SRYQ05066 204 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 HSPB2Q16082 182 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 NXNQ6DKJ4 435 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 ARSKQ6UWY0 536 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 LACC1Q8IV20 430 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 NAXEQ8NCW5 288 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 OR5D16Q8NGK9 328 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 OR4A15Q8NGL6 344 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 MIPOL1Q8TD10 442 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 CCDC115Q96NT0 180 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 TRIB1Q96RU8 372 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 RUBCNLQ9H714 662 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 HHATLQ9HCP6 504 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 SLCO1B3Q9NPD5 702 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 NPDC1Q9NQX5 325 aaPredicted RBP14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 DKKL1Q9UK85 242 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 USH1CQ9Y6N9 552 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 ABCA12Q86UK0 2595 aa14.6□□□□□ -0.07
PDLIM5-216ENST00000511767 OR2M5A3KFT3 312 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 C9JVG2 144 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 LINC01387J3KSC0 135 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 TGDSO95455 350 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 C1QCP02747 245 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 PGRP06401 933 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 PEPDP12955 493 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 TCEA1P23193 301 aaKnown RBP14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 SUCLG1P53597 346 aaKnown RBP14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 ATP12AP54707 1039 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 PPP2R2AP63151 447 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 GANABQ14697 944 aaKnown RBP14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 PDCD4Q53EL6 469 aaKnown RBP14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 DCST2Q5T1A1 773 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 GLB1L3Q8NCI6 653 aaPredicted RBP14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 CHDHQ8NE62 594 aaPredicted RBP14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 OR5M1Q8NGP8 315 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 LRRC8CQ8TDW0 803 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 OR52E6Q96RD3 313 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 KLHDC3Q9BQ90 382 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 SDR39U1Q9NRG7 319 aaPredicted RBP14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 ZNF629Q9UEG4 869 aaPredicted RBP14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 ARHGAP21Q5T5U3 1957 aa14.59□□□□□ -0.07
PDLIM5-216ENST00000511767 RNF103-CHMP3A0A140T963 221 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 MBD3L4A6NDZ8 208 aaPredicted RBP14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 MBD3L3A6NE82 208 aaPredicted RBP14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 CCDC154A6NI56 674 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 MBD3L5A6NJ08 208 aaPredicted RBP14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 FAM90A27PA6NNH2 459 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 SYT5O00445 386 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 SCDO00767 359 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 UBDO15205 165 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 FCMRO60667 390 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 SLC22A3O75751 556 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 IL2RAP01589 272 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 COX6B1P14854 86 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 IDO1P14902 403 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 HPGDP15428 266 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 IGFBP2P18065 325 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 ATP6V1C1P21283 382 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 IDH3AP50213 366 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 ZNF136P52737 540 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 CASP9P55211 416 aa14.58□□□□□ -0.08
PDLIM5-216ENST00000511767 RCAN2Q14206 197 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms