RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 KCNIP4Q6PIL6 250 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 CWC27Q6UX04 472 aaKnown RBP1.7□□□□□ -2.14
XRCC4-204ENST00000509268 SLC24A5Q71RS6 500 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 CENPQQ7L2Z9 268 aaPredicted RBP1.7□□□□□ -2.14
XRCC4-204ENST00000509268 NLRP9Q7RTR0 991 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 DHDDSQ86SQ9 333 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 ZNF554Q86TJ5 538 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 KCNMB4Q86W47 210 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 GPBP1Q86WP2 473 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 C17orf64Q86WR6 236 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 PLD3Q8IV08 490 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 ABCA7Q8IZY2 2146 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 MFSD9Q8NBP5 474 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 BBS1Q8NFJ9 593 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 OR2T12Q8NG77 320 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 OR7A2PQ8NGA2 310 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 OR4K14Q8NGD5 310 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 OR4D5Q8NGN0 318 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 OR1L4Q8NGR5 311 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 M1APQ8TC57 530 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 TSEN15Q8WW01 171 aaKnown RBP1.7□□□□□ -2.14
XRCC4-204ENST00000509268 RASL10AQ92737 203 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 UPRTQ96BW1 309 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 EFHD2Q96C19 240 aaPredicted RBP1.7□□□□□ -2.14
XRCC4-204ENST00000509268 LRRC39Q96DD0 335 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 SLC47A1Q96FL8 570 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 AKR1E2Q96JD6 320 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 TECTBQ96PL2 329 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 SYT15Q9BQS2 421 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 ERVK-6Q9BXR3 956 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 TDRD1Q9BXT4 1180 aaKnown RBP1.7□□□□□ -2.14
XRCC4-204ENST00000509268 DNTTIP1Q9H147 329 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 AZI2Q9H6S1 392 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 VIPAS39Q9H9C1 493 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 APOBEC3GQ9HC16 384 aaKnown RBP1.7□□□□□ -2.14
XRCC4-204ENST00000509268 ZNF160Q9HCG1 818 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 GDF3Q9NR23 364 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 AHSPQ9NZD4 102 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 GNG12Q9UBI6 72 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 PEF1Q9UBV8 284 aaKnown RBP1.7□□□□□ -2.14
XRCC4-204ENST00000509268 POMT2Q9UKY4 750 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 TBC1D24Q9ULP9 559 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 FZR1Q9UM11 496 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 CA5BQ9Y2D0 317 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 STK38LQ9Y2H1 464 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 WDR45Q9Y484 360 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 NEDD4P46934 1319 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 SPATA31D1Q6ZQQ2 1576 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 INSRP06213 1382 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 CCDC7Q96M83 1385 aa1.7□□□□□ -2.14
XRCC4-204ENST00000509268 FGD5Q6ZNL6 1462 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 A0A1W2PPE3 182 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 TTC26A0AVF1 554 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 FBLL1A6NHQ2 334 aaKnown RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 SNURFLB1AK76 121 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 ZNF879B4DU55 563 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 LMO7DNF2Z398 122 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 TEX46H3BTG2 121 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 SRPX2O60687 465 aaPredicted RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 TOXO94900 526 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 GNA14O95837 355 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 CLPTM1O96005 669 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 PGK1P00558 417 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 OPN1LWP04000 364 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 GAPDHP04406 335 aaKnown RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 IGF1P05019 195 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 ADORA3P0DMS8 318 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 TROVE2P10155 538 aaKnown RBP eCLIP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 POU2F1P14859 743 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 UQCRBP14927 111 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 GCFC2P16383 781 aaKnown RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 CAPN2P17655 700 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 EFNA1P20827 205 aaPredicted RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 TBXA2RP21731 343 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 PRKACBP22694 351 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 PSMA2P25787 234 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 CD1BP29016 333 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 EPHA2P29317 976 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 MATKP42679 507 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 MAGEA5P43359 124 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 STARP49675 285 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 CDH11P55287 796 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 BACE1P56817 501 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 SNRPD1P62314 119 aaKnown RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 IRF8Q02556 426 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 MERTKQ12866 999 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 C1orf61Q13536 156 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 ITPK1Q13572 414 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 GK3PQ14409 553 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 KIR2DS3Q14952 304 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 WDR43Q15061 677 aaKnown RBP eCLIP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 MTHFSDQ2M296 383 aaKnown RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 RNF212Q495C1 297 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 C6orf226Q5I0X4 101 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 CELF3Q5SZQ8 465 aaKnown RBP1.69□□□□□ -2.14
XRCC4-204ENST00000509268 RAET1LQ5VY80 246 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 PWWP2BQ6NUJ5 590 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 STEAP1BQ6NZ63 245 aa1.69□□□□□ -2.14
XRCC4-204ENST00000509268 TMEM184AQ6ZMB5 413 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms