RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 OR52N5Q8NH56 324 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 UHMK1Q8TAS1 419 aaKnown RBP3.38□□□□□ -1.87
RNF4-211ENST00000509206 NEU4Q8WWR8 484 aaPredicted RBP3.38□□□□□ -1.87
RNF4-211ENST00000509206 LPGAT1Q92604 370 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 SGCDQ92629 289 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 KRT35Q92764 455 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 TMIGD2Q96BF3 282 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 MTBPQ96DY7 904 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 OMA1Q96E52 524 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 VPS39Q96JC1 886 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 F2RL3Q96RI0 385 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 GPR21Q99679 349 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 RBM4BQ9BQ04 359 aaKnown RBP3.38□□□□□ -1.87
RNF4-211ENST00000509206 TBCDQ9BTW9 1192 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 C1QTNF6Q9BXI9 259 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 C1QTNF5Q9BXJ0 243 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 DDX47Q9H0S4 455 aaKnown RBP3.38□□□□□ -1.87
RNF4-211ENST00000509206 OR10A5Q9H207 317 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 DSN1Q9H410 356 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 ESM1Q9NQ30 184 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 TIGARQ9NQ88 270 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 MS4A12Q9NXJ0 267 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 EHD3Q9NZN3 535 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 BFARQ9NZS9 450 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 ZIM2Q9NZV7 527 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 SLC17A6Q9P2U8 582 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 FBLN5Q9UBX5 448 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 TRMT6Q9UJA5 497 aaKnown RBP3.38□□□□□ -1.87
RNF4-211ENST00000509206 FBXO9Q9UK97 447 aaPredicted RBP3.38□□□□□ -1.87
RNF4-211ENST00000509206 DHRS7Q9Y394 339 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 EPPK1P58107 5090 aaKnown RBP3.38□□□□□ -1.87
RNF4-211ENST00000509206 PRR14LQ5THK1 2151 aa3.38□□□□□ -1.87
RNF4-211ENST00000509206 A0A0G2JMP0 313 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 A0A0X1KG70 313 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 OR2M5A3KFT3 312 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 CTAGE15A4D2H0 777 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 GOLGA6L10A6NI86 522 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 B9A039 149 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 GOLGA6L19H0YKK7 550 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 AP3B1O00203 1094 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 SCDO00767 359 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 ACOX3O15254 700 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 PJA2O43164 708 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 CXCL13O43927 109 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 AKR1B10O60218 316 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 UGT2B11O75310 529 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 SH3BGRLO75368 114 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 PRKRAO75569 313 aaKnown RBP3.37□□□□□ -1.87
RNF4-211ENST00000509206 GCM2O75603 506 aaPredicted RBP3.37□□□□□ -1.87
RNF4-211ENST00000509206 TJP3O95049 919 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 PRSS23O95084 383 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 CLDN9O95484 217 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 GPR75O95800 540 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 WNT11O96014 354 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 TFP02787 698 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 OPN1LWP04000 364 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 F7P08709 466 aaPredicted RBP3.37□□□□□ -1.87
RNF4-211ENST00000509206 SLC35E2BP0CK96 405 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 SLC35E2P0CK97 266 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 C1GALT1C1LP0DN25 315 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 MTHFD2P13995 350 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 PRKCAP17252 672 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 ADRA2CP18825 462 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 GNAZP19086 355 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 PGCP20142 388 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 OGNP20774 298 aaKnown RBP3.37□□□□□ -1.87
RNF4-211ENST00000509206 NT5EP21589 574 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 ME2P23368 584 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 ATP5A1P25705 553 aaKnown RBP3.37□□□□□ -1.87
RNF4-211ENST00000509206 GIFP27352 417 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 PIK3R1P27986 724 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 NMBRP28336 390 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 IL12BP29460 328 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 AGTR1P30556 359 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 LSP1P33241 339 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 SERPINF1P36955 418 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 FDFT1P37268 417 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 SSR2P43308 183 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 GPR6P46095 362 aaPredicted RBP3.37□□□□□ -1.87
RNF4-211ENST00000509206 IDH3GP51553 393 aaPredicted RBP3.37□□□□□ -1.87
RNF4-211ENST00000509206 AP1S2P56377 157 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 CARD18P57730 90 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 MRPS22P82650 360 aaKnown RBP3.37□□□□□ -1.87
RNF4-211ENST00000509206 MYBPC1Q00872 1141 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 MYL5Q02045 173 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 DUSP2Q05923 314 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 ZP4Q12836 540 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 STX5Q13190 355 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 SLAMF1Q13291 335 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 EFR3AQ14156 821 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 GANABQ14697 944 aaKnown RBP3.37□□□□□ -1.87
RNF4-211ENST00000509206 IQCB1Q15051 598 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 RNPS1Q15287 305 aaKnown RBP3.37□□□□□ -1.87
RNF4-211ENST00000509206 TRIP10Q15642 601 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 TAF9Q16594 264 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 PPP1R3AQ16821 1122 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 ZSWIM7Q19AV6 140 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 DEFB121Q5J5C9 76 aa3.37□□□□□ -1.87
RNF4-211ENST00000509206 ZNF362Q5T0B9 420 aaPredicted RBP3.37□□□□□ -1.87
RNF4-211ENST00000509206 SAXO2Q658L1 398 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms