RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 GTSCR1Q86UQ5 136 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 TPRA1Q86W33 373 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 PLD3Q8IV08 490 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 OFCC1Q8IZS5 231 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 FAM58AQ8N1B3 248 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 GABRG1Q8N1C3 465 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 CRYBG2Q8N1P7 616 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 DNAJC22Q8N4W6 341 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 DHRSXQ8N5I4 330 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 GVQW1Q8N7I0 195 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 SLC37A3Q8NCC5 494 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 ZNF248Q8NDW4 579 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 NFAM1Q8NET5 270 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 OR13F1Q8NGS4 319 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 CLHC1Q8NHS4 586 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 LRRC20Q8TCA0 184 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 FBXO25Q8TCJ0 367 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 GRHL3Q8TE85 626 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 PDCD6IPQ8WUM4 868 aaKnown RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 OR1E3Q8WZA6 343 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 P3H4Q92791 437 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 TADA1Q96BN2 335 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 ZBED3Q96IU2 234 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 LURAP1Q96LR2 239 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 AGAP3Q96P47 875 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 CCT8L2Q96SF2 557 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 ATOH8Q96SQ7 321 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 LPAR4Q99677 370 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 NKX3-1Q99801 234 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 KCNS3Q9BQ31 491 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 C19orf43Q9BQ61 176 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 DPH7Q9BTV6 452 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 TDRD1Q9BXT4 1180 aaKnown RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 SLITRK2Q9H156 845 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 RANBP3Q9H6Z4 567 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 C8orf33Q9H7E9 229 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 GEMIN7Q9H840 131 aaKnown RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 MTHFD2LQ9H903 347 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 CALHM2Q9HA72 323 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 ZBTB20Q9HC78 741 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 PNO1Q9NRX1 252 aaKnown RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 AGPAT3Q9NRZ7 376 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 MAN2C1Q9NTJ4 1040 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 SMOXQ9NWM0 555 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 TEX10Q9NXF1 929 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 MRPL39Q9NYK5 338 aaKnown RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 IFNKQ9P0W0 207 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 ONECUT1Q9UBC0 465 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 CD300AQ9UGN4 299 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 CYTH4Q9UIA0 394 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 PACSIN2Q9UNF0 486 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 FAF1Q9UNN5 650 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 SLC6A5Q9Y345 797 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 KLF2Q9Y5W3 355 aaPredicted RBP2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 PRSS21Q9Y6M0 314 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 GRIN2DO15399 1336 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 PTPRUQ92729 1446 aa2.07□□□□□ -2.08
DEPDC1B-204ENST00000509006 TRAV25A0A0B4J276 109 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 A0A0J9YVX5 310 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 TEX13DA0A0J9YY54 714 aaPredicted RBP2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 LRIT2A6NDA9 550 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 FRG2CA6NGY1 282 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 FBLL1A6NHQ2 334 aaKnown RBP2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 A8MUA0 341 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 SMIM1B2RUZ4 78 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 F5H6K3 240 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 HAS3O00219 553 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 NR5A2O00482 541 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 FPGTO14772 594 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 KLF11O14901 512 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 DUX1O43812 170 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 UPK3AO75631 287 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 CRTAPO75718 401 aaPredicted RBP2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 GNA14O95837 355 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 GOT2P00505 430 aaKnown RBP2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 CALCAP01258 141 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 S100A6P06703 90 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 ERCC1P07992 297 aaPredicted RBP2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 IGFBP1P08833 259 aaPredicted RBP2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 ANXA3P12429 323 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 CPN1P15169 458 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 HOXB8P17481 243 aaPredicted RBP2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 PGCP20142 388 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 CYP2B6P20813 491 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 CCNOP22674 350 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 CA4P22748 312 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 GLRA1P23415 457 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 UCP1P25874 307 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 GIFP27352 417 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 LAP3P28838 519 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 EPHA2P29317 976 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 YWHABP31946 246 aaKnown RBP2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 IFNA8P32881 189 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 RPL9P32969 192 aaKnown RBP2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 NAMPTP43490 491 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 LEPRP48357 1165 aaKnown RBP2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 FHITP49789 147 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 BCAP31P51572 246 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 CCNG1P51959 295 aa2.06□□□□□ -2.08
DEPDC1B-204ENST00000509006 EFNB2P52799 333 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms